Nitrincola iocasae: F5I99_09270
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Entry
F5I99_09270 CDS
T06212
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
nik
Nitrincola iocasae
Pathway
nik02020
Two-component system
nik02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F5I99_09270
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
F5I99_09270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
nik02035
]
F5I99_09270
Bacterial motility proteins [BR:
nik02035
]
Flagellar system
Chemotaxis proteins
MCPs
F5I99_09270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
DUF2730
Sec8_N
DUF1664
Raptor_N
Fib_alpha
Motif
Other DBs
NCBI-ProteinID:
QEW06676
UniProt:
A0A5J6LEF0
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Position
1978881..1981049
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AA seq
722 aa
AA seq
DB search
MTGILTVRFIINAMFGLMLAILLLIGGFAIFSANQLSDDLTFLQSETASVADSLVQSVDA
LTQMEGQVKQLSKAQDSLSTLQALQLRLDETEAASGEIDAGLTQLRDVSAQQNENMNKIS
EVTRQIATNLEMVSGPLHSMITAAQQINQHSLHALIDFYKLSQGEPGALESVEANLQQVY
RGTSAMTSAMFNVDQSDNTRSLLVDLRRDLRPFRGQIRQFAAMEYSPERTALRQEIVTAI
EEMIELSIQIQSGSLELANRTAAEANALAQQTQAATAEQIAASQTSAEVLDNALRLINQS
NESTHSVVSDLTSSVEQLTLSLQSIPEVERQIETSLNAVQRAVASDQVERIDEAGNRALQ
AQKNAQTIPIVLLVFILIAFAISAVVAVYLQRLIVKPLANFVSGVRRVTDNDLRTQVTDE
GAIGELKAVIGSVNAMIDGLRQNVLDMKQSGQNISESARLMANTSTTTRDALEQQKQGEQ
AIVDSTGALADMVRQVANSGAAAGEQARAADEVIKQSQQDIENAKREMASLAGTVNRSNE
VIQSLKQQSDNIGQVINVIQNVSGQTNLLALNAAIEAARAGEHGRGFAVVADEVRQLAQR
TSDATIEIRDLIEQIQAGSDLGAESMAEGLAQVARNTQATESVALSLESVIQQVATISRL
NLEIGEHTRQQLQQLDSIDAGVDSVRRQSEQASAAVLDNVRASENLNRTASTLGDLVKRF
SI
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgacggggattttgacagtacgtttcatcataaatgccatgtttggcttgatgttggct
attttactattgattggcggttttgccattttcagtgctaatcaacttagtgatgatttg
acctttttgcaatcagaaacagccagtgttgcagacagtctggtgcaatcagtggatgcg
ctgacgcagatggaagggcaagttaagcagctctcgaaagcgcaggattcgctgtctacc
ctccaagcattgcagttgcgtctggatgaaactgaagcggccagtggtgaaatcgatgcc
gggttgactcagttgcgagatgtatcagcgcaacagaatgaaaacatgaataaaatcagt
gaggtgacccgtcaaattgccaccaatctggagatggtttctggcccgttgcactccatg
atcacggcagctcaacaaatcaaccagcattcattacatgcactcatcgacttttacaaa
cttagccagggtgaacccggagcactggagtcggtggaagcgaatctacaacaggtttat
cgaggcacctcggcaatgaccagtgccatgtttaatgtggaccagagcgataatacccgt
tcattactagtagatctgcgtcgcgatctgcgccctttccgtgggcaaatacgtcagttt
gccgctatggaatactcgccggaacgtacagcccttcgacaggaaatcgtaacggctatc
gaggagatgattgaactttcaattcaaattcaaagcggcagtctggaactggctaaccgt
actgccgcagaagccaatgcgcttgctcagcagacccaggcagctacggccgagcagata
gccgccagccaaacctcggctgaggtgttggataacgcgctgagactcattaaccagtcc
aatgaaagcactcattctgtcgtcagtgatctgacatcctctgtagagcagctaactctg
tctctgcaaagtatccctgaagttgagcgccagatagaaacgtcactcaatgcggtgcag
cgggctgttgcctctgatcaggttgagcgcatagatgaagccggcaaccgtgcgctccaa
gcgcagaaaaacgcacaaactataccgattgtcttattagtgtttatcctcatcgctttc
gctatcagtgcggtggttgccgtgtatctacagcgactgattgtgaaacccttggctaac
tttgtcagcggtgtacgccgtgtaaccgacaatgatttgcgtacgcaggttactgatgaa
ggcgctattggtgagctgaaagcagtaatcggctcggtaaatgcgatgatagatgggcta
cgtcaaaatgtgctggatatgaaacaatctggccaaaatatcagtgaaagcgcccggttg
atggcgaatacatcaaccacaacccgtgatgcactggagcagcagaagcaaggcgaacag
gcgattgttgattcaaccggcgctttagctgatatggtgcgacaggtggcgaacagtggt
gccgcagccggagagcaagcgcgtgctgccgatgaagtgatcaaacagagtcagcaggac
atagaaaatgccaagcgagagatggcaagtctggctggaacagttaaccgctcaaatgaa
gtaattcagtcactcaagcagcagagtgacaatatcggtcaggtaatcaatgtcattcaa
aatgtatctggtcagactaatttgttggctttgaatgcggccatagaagccgctcgggcc
ggtgaacatggccgtggctttgccgttgtcgcagatgaagtcagacagttagctcagcgg
accagtgatgccaccattgaaatacgtgatttaattgagcaaattcaggctggctcagac
ctgggggccgagtccatggcagaggggctggcgcaggttgccagaaatacccaggcgact
gagtctgttgcgctgtcgctggagtcagtcattcagcaagtggctaccatcagtcgtctg
aatctggaaattggggagcatacccgtcagcaattgcagcaactggatagtattgatgcg
ggtgttgacagcgtacgtcgtcagtcggaacaagccagcgcagccgtgctggataatgtc
agggctagtgagaacctaaaccgtacagccagcactctcggtgatctggtcaagcgcttc
tctatctaa
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