Nitratiruptor sp. SB155-2: NIS_0883
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Entry
NIS_0883 CDS
T00565
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
nis
Nitratiruptor sp. SB155-2
Brite
KEGG Orthology (KO) [BR:
nis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nis03016
]
NIS_0883 (trmE)
Transfer RNA biogenesis [BR:
nis03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
NIS_0883 (trmE)
Prokaryotic type
Methyltransferases
NIS_0883 (trmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
Roc
GTP_EFTU
AIG1
Ras
Serine_rich
FapA
RsgA_GTPase
Sec10_N
Baculo_PEP_C
ATP_bind_1
AAA_24
AAA_16
ABC_tran
cobW
Cap4_nuclease
AAA_28
fvmX5
BORCS7
Focal_AT
AAA_21
Nuc_deoxyri_tr2
DUF2408
DUF1643
ApoLp-III
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
BAF69995
UniProt:
A6Q3D6
LinkDB
All DBs
Position
885001..886347
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AA seq
448 aa
AA seq
DB search
MNFENNSTIAAIATAYGVGSIAIVRISGPKSLSIAQKLSKKKDIQPRVAHLVTLYDDQSE
PIDQAILIYFQAPKSFTGEDVVEFQCHGGVVVANMILQELLKAGARLANPGEFSKRAFFN
GKIDLSEAEAIAKMIEAKSEDAAKILAKQIKGELKNYIENLREKLIRILAYVEVNIDYAE
EDLPKDLQEQIEQQLNDIQEELQKIVASSKRRAGLIEGFKVAIIGKPNTGKSSLLNALLD
YERAIVSDIAGTTRDTIEESVRIGTHLVRFVDTAGIREAHDTIEKIGIERSIQAIEESDI
VIAMFDASKPLDAEDKKILELIESYKDQKEFIVVANKVDKGKHLDLSDFDALYMSVKKEI
TPLTQKLQKLLDSFANTEEIMLVTSRQIEAVTYALENINQARTPLQMGELEIFAFHINRV
IESIGSITRPMQSSELLDKMFGEFCLGK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcgaaaataattccaccatagccgctatcgctacagcctatggagtgggctcc
atagcgattgttcgtatcagtggtccaaaatcgttgagcattgcgcaaaaactctccaaa
aaaaaggatattcaaccaagagtagcccatctcgtaacgctttacgatgatcaaagtgaa
ccaattgatcaagcgatcctcatctatttccaggcacccaaaagtttcaccggcgaagat
gttgtagagtttcagtgccatggtggagttgttgttgcaaatatgattttgcaagagctg
ctcaaagctggtgccagactcgcaaatcccggtgaatttagcaaacgtgcctttttcaat
ggtaaaatagatcttagtgaagcagaagcgatcgcgaagatgatcgaggctaaaagtgaa
gatgctgcgaaaattttggccaagcagattaaaggagagctcaaaaactatatagaaaat
ctgcgagaaaaactgatccgcattttagcttatgtagaggtcaatatcgactatgccgaa
gaggatctgcccaaagatttacaggaacagatagaacagcaactcaacgatatccaagag
gagctccaaaaaatcgttgcatcaagtaagcgaagggctggactgatcgaaggttttaaa
gtcgctatcattggaaaaccgaataccggaaaaagctctttactcaacgccttgctcgat
tatgagcgagcgattgtcagcgatatagctggaacaacaagagacaccattgaagagagc
gttcgcataggaacgcatcttgtaaggttcgtagataccgccggtatcagagaagcgcac
gatacgatagaaaaaataggaattgaaagaagcattcaagcgatcgaagagagtgatatc
gttatagctatgtttgatgcttcaaaacccttagatgcggaagataaaaagatattggaa
ctgattgagagctataaagaccaaaaagagttcatcgtagtagccaataaggtagataaa
ggaaagcatctagacctatccgattttgacgctttgtatatgagtgtaaaaaaagagatt
acacctttgactcaaaaactccaaaaactccttgatagtttcgcaaatacagaggagatc
atgcttgtaacaagcaggcagatagaagcggtgacatatgccctagaaaacataaatcaa
gcacgtacacctttgcagatgggcgagcttgagatattcgcttttcatatcaacagggtc
attgaatcgataggttctattaccagaccgatgcaaagtagtgaactgttagataaaatg
tttggggagttctgtcttggcaagtag
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