Nitrosomonas sp. AL212: NAL212_1545
Help
Entry
NAL212_1545 CDS
T01443
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
nit
Nitrosomonas sp. AL212
Pathway
nit03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nit00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NAL212_1545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nit03400
]
NAL212_1545
DNA repair and recombination proteins [BR:
nit03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NAL212_1545
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NAL212_1545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
UVR
ResIII
DEAD
AAA_30
Kinesin
UB2H
DALR_1
Motif
Other DBs
NCBI-ProteinID:
ADZ26426
UniProt:
F9ZJ08
LinkDB
All DBs
Position
1485921..1487951
Genome browser
AA seq
676 aa
AA seq
DB search
MIVTFPNSPFKLHQAFAPAGDQPAAIAQLIEGINDGLAFQTLLGVTGSGKTYTIANMIAH
SGRPAILIAPNKTLAAQLYAEMREFFPENAIEYFVSYYDYYQPEAYVPARDLFIEKDSSI
NEHIEQMRLSATKSLLERDDAIIVATVSCIYGIGDPVDYHGMILHLRSGEKISQRDVIKR
LTEMQYERNELEFKRGVFRVRGDVVDIFPAENSEAAVRVSLFDDEVDNLSLFDPLTGRML
QKLSRFTVYPSSHYVTPRSTTLRAMETIKDELRERLEHYYQEHRLVEAQRLEQRTRFDLE
MLNELGFCKGIENYSRHLSGKNPGEPPPTLLDYLPPNALMIIDESHVTVPQIGGMYKGDR
SRKENLVNYGFRLPSALDNRPLRFEEFEKRMPQTVFVSATPANYEHQHSGQIVEQVVRPT
GLVDPIIEVRPVTTQVDDLMSEVHLRTAKNERVLVTTLTKRMAEDLTDYFSDHKIKVRYL
HSDIDTVERVEIIRDLRLGQFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLI
QTIGRAARHINGTAILYAETITRSMRVAIDETNRRRQKQIDHNVQHQIIPRSVHKRIKDL
IDGVYNYESSQQNLKAAQTQARYDAMSESQLAKEIQRVEKKMFSAAKNLEFEQAARYRDE
LKSLKNKLLIGFPDMT
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgtaaccttccccaatagtccgttcaaattacatcaagcatttgcacccgcaggc
gaccaacctgcagctatcgcacagctaattgagggaataaacgatggtcttgcatttcaa
acattactgggtgttaccggttcggggaaaacctacacgatcgccaatatgatcgcccac
tcaggacgtccggcaattcttattgcgccaaacaaaacattggccgcacaactttatgcc
gagatgcgtgaattctttccggagaatgccattgagtactttgtatcttattacgattac
tatcaaccggaagcctatgtgcctgcacgggatctgtttatcgaaaaagattccagcatc
aacgagcatatcgaacagatgcgcctgtctgcgacaaaatccttgctggagcgcgatgat
gcaattatcgtggctacggtgtcctgtatctacggtatcggtgatccggtagattatcat
ggcatgattctgcatttgcgcagcggtgagaagatttcccagcgtgatgttataaagcgc
ttgaccgaaatgcaatacgaacgtaatgaattggaattcaagcgcggggtatttcgtgta
aggggtgacgtggtggatatttttccggcggaaaattcggaagctgcggtaagggtatca
ttattcgatgatgaagtggataacctgtctctatttgacccgctgaccggtcgcatgctg
cagaagttatcgcgatttaccgtctatccttccagtcactatgtgacgccgcgtagcacc
acgttacgcgcaatggaaactatcaaagatgaactgcgcgagcggctggaacattactat
caggagcatcgtctggttgaagcccagcgtcttgaacagagaacaagatttgatctggaa
atgcttaatgaattgggattctgcaaagggattgaaaattattcacgtcatctttccggc
aagaaccccggtgaaccgccaccaaccctgctggattacttgccacccaatgcattaatg
atcattgacgagagccatgtcactgtgccgcagatcggaggaatgtataagggtgatcgt
tcacgcaaggagaatctggtgaattatggttttcgcctgccgtccgccttggataatcgt
ccattgcgatttgaagaatttgaaaaaagaatgccgcagactgtgttcgtatcggcaacc
cccgcgaattatgagcatcagcacagcggacagatcgtcgagcaagtggtacggccaacg
ggattggtcgatccgataattgaggtacgtccggtaacgactcaggtcgatgatttaatg
tctgaagttcacttgcgcactgccaaaaatgagcgcgtgctggttacgacactcactaag
cgcatggcggaagatttaaccgattatttttcggatcacaaaatcaaggtacggtatttg
cactctgatatcgatacggtagaacgcgttgaaattatccgtgatttgcgtctggggcaa
tttgatgtgctggttgggattaatttgttacgtgaaggtttggatattcctgaagtttca
ctggttgcgatattggacgctgataaggaaggcttcctgcgctcggaaaggtcactgatt
caaactatcggccgtgctgcccgtcatatcaacggcacggccattctgtacgctgaaacc
ataacccgatccatgcgtgttgcgattgatgagacaaatcgtcgacgtcagaagcagata
gaccataacgtgcagcatcaaattattccccgatcggtgcataaaagaattaaagatctc
atcgatggcgtttataactatgaatcatcgcagcaaaacctcaaagcagcacaaacacag
gcacgttatgatgccatgagtgaatcacaattggccaaggagattcaacgtgttgaaaaa
aaaatgttcagtgctgcaaagaacttggaatttgaacaagcagcacgctatcgagatgaa
ctgaaaagtctgaagaataaattgctgatcggttttcccgatatgacataa
DBGET
integrated database retrieval system
