Nitrosospira lacus: EBAPG3_003920
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Entry
EBAPG3_003920 CDS
T04907
Name
(GenBank) ribonuclease E/G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
nlc
Nitrosospira lacus
Brite
KEGG Orthology (KO) [BR:
nlc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nlc03019
]
EBAPG3_003920
03009 Ribosome biogenesis [BR:
nlc03009
]
EBAPG3_003920
Messenger RNA biogenesis [BR:
nlc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EBAPG3_003920
Ribosome biogenesis [BR:
nlc03009
]
Prokaryotic type
rRNA processing factors
EBAPG3_003920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Motif
Other DBs
NCBI-ProteinID:
ARO86986
UniProt:
A0A1W6SMF8
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All DBs
Position
875828..877279
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AA seq
483 aa
AA seq
DB search
MTSEILVNVTPQETRVAVMEQGAVQELHIERTSSRGIVGNIYNGRVTRVLPGMQSAFVDI
GLDRAAFLHLADIWRLRQSEDADKPIERLLYEGKNILVQVIKDSISTKGARLSTQVSIAG
RMLVYLPQVSHIGISQRIEDETERKLLREKLKHLLPPGEKGGFIIRTMAEAASEQDLQTD
IDYLYKLWHDIEGKSSTGMPGLLYQDLNLSHRVLRDFVNVGTARILVDSRETFQKMVAFA
RDYMANVTERVDHYAGERPLFDLYGVEDEIEKCLARRVNLKSGGYLIIDQTEALTTVDVN
TGGFVGVRSFDDTIFKTNLEAAQVIARQLRLRNLGGIIIIDFIDMESAEHKNAVLAEFKK
SLMKDRTRMTVNGFTALGLVEMTRKRTRESLAHILCETCPTCQGRSEVRTAQTMCYEILR
ELLRESRQFDAREFRILASQQVIDLFLDEESQSLAQLGDFIAKPISLQVEAAYTQEQYDV
ILM
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgactagcgaaattcttgtcaacgtcacgccgcaggaaactcgtgttgccgtaatggag
cagggtgcggtgcaagagttgcatatagagcgtaccagtagccgtggaattgtaggcaat
atttacaacgggcgcgtcacccgggtattgccgggaatgcaatcggctttcgtcgatatc
ggtctggatcgcgccgccttccttcatctggctgacatctggaggctgcgccaaagcgaa
gatgccgataagcccattgaaagattactgtacgagggcaagaatattctcgttcaggtc
atcaaggattccatcagtaccaaaggtgcacgactatccactcaagtgagtatcgccggg
cggatgctggtgtatctcccgcaggtgtcccacatcgggatttcgcagcgtatcgaggat
gaaaccgagcgcaagttgctgcgcgaaaagctaaaacacttgctgcctccgggtgaaaaa
gggggttttattattcgcaccatggcggaagccgccagtgagcaggacttgcagacagat
atcgattatctgtacaagttgtggcacgacattgaagggaaatcttcaaccggtatgccc
ggattgctctatcaggacctgaatctcagccatcgtgtattgcgcgacttcgtgaatgtt
ggtacggcgcgtattctggtggattcacgcgagacctttcagaagatggttgcttttgcg
cgagactatatggccaatgtgacggaacgcgtcgatcattatgccggagagcgcccatta
tttgatctgtatggtgtcgaagatgagattgaaaaatgcctggcgcgacgggtaaacctt
aaatccggcggctacctgatcatcgaccagaccgaggcgctcaccacagtggatgtcaac
accggcggattcgtcggtgtgcgcagcttcgacgacaccattttcaaaaccaacctcgaa
gcggcgcaggtcatcgcgcgtcagttgcgcctgcgaaatctgggcggtattattattatt
gattttatagatatggaaagcgcggagcataagaatgccgtgctcgccgaattcaaaaag
tcactgatgaaggaccggacgcgcatgaccgtcaatggtttcaccgcgctcgggttggtg
gaaatgacacgaaaacgcacgcgggaaagccttgcccatattttgtgcgagacgtgtcct
acttgccagggccgcagcgaggtcagaaccgcgcaaacgatgtgttacgaaatcctgcgc
gaattattgcgcgaatcccgtcaatttgacgcccgcgagtttcgtattctggcttcacaa
caagtcatcgatctattccttgatgaggaatcgcaaagtctggcccaactgggagatttt
atcgccaagcccatcagtctgcaggtagaagccgcttatacgcaggaacaatatgatgtc
attctgatgtag
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