Nomascus leucogenys (northern white-cheeked gibbon): 100592679
Help
Entry
100592679 CDS
T03265
Symbol
CDH23
Name
(RefSeq) cadherin-23 isoform X1
KO
K06813
cadherin 23
Organism
nle
Nomascus leucogenys (northern white-cheeked gibbon)
Brite
KEGG Orthology (KO) [BR:
nle00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
nle03037
]
100592679 (CDH23)
04515 Cell adhesion molecules [BR:
nle04515
]
100592679 (CDH23)
Cilium and associated proteins [BR:
nle03037
]
Primary cilia and associated proteins
USH complex and associated proteins
100592679 (CDH23)
Cell adhesion molecules [BR:
nle04515
]
Cadherins
Major cadherins
100592679 (CDH23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_3
Cadherin_2
RET_CLD1
Sde0182_C
TFIIB_C_1
Motif
Other DBs
NCBI-GeneID:
100592679
NCBI-ProteinID:
XP_030655108
Ensembl:
ENSNLEG00000016188
LinkDB
All DBs
Position
18:21767181..21858205
Genome browser
AA seq
1897 aa
AA seq
DB search
MRGPRPLDRERNSSHVLIVEAYNHDLGPMRSSVRVIVYVEDVNDEAPVFTQQQYSRLGLR
ETAGIGTSVIVVQATDRDSGDGGLVNYRILSGAEGKFEIDESTGLIITMDYLDYETKTSY
VMNVSATDQAPPFNQGFCSVYITLLNELDEAVQFSNASYEAAILENLALGSEIVRVQAYS
IDNLNQITYRFDAYTSAQAKALFKIDAITGVITVQGLVDREKGDFYTLTVVADDGGPKVD
STVKVYITVLDENDNSPRFDFTSDSAVSVPEDCPVGQRVATVKAWDPDAGSNGQVVFSLA
SGNIAGAFEMVTTNDSIGEVFVARPLDREELDHYILKVVASDRGTPPRKKDHILQVTILD
INDNPPVIESPFGYNVSVNENVGGGTAVVQVRATDHDIGINSVLSYYITEGNKDMTFRMD
RISGEIATRPAPPDRERQSFYHLVVTVEDEGTPTLSATTQVYVTIVDENDNAPMFQQPHY
EVLLDEGPDTLNTSLITIQALDLDEGPNGTVTYAIVAGNIINTFRIDRHMGVINAAKELD
YEISHGRYTLIVTATDQCPILSHRLTSTTTVLVNVNDINDNMPTFPRDYEGPFEVTEGQP
GPRVWTFLAHDQDSGPNGQVEYSIVDGDPLGEFVISPVEGVLRVRKDVELDRETIAFYNL
TICARDRGMPPLSSTMLVGIWVLDINDNDPVLLNLPMNITISENSPVSSFVAHVLASDAD
SGCNARLTFNITAGNRERAFFINATTGIVTVNRPLDREQIPEYKLTISVKDNPENPRIAR
RDYDLLLIFLSDENDNHPLFTKSTYQAEVMENSPAGSVMVKSPMNRELVATYEVTLSVID
NASDLPELSVSVPNAKLTVNVLDVNDNTPQFKPFGITYYTERILEGATPGTTLIAVAAVD
PDKGLNGLVTYTLLDLVPPGYVQLEDPSAGKVIANQTVDYEEVHWLNFTVRASDNGSPPR
AAEIPVYLEIMDINDNNPIFDQPSYQEAVFEDVPVGTIILTVTATDADSGNFALIEYSLG
DGESKFAINPTTGDIYVLSSLDREKKDHYILTALAKDNPGDVASNRRENSVQVVIQVLDV
NDCRPQFSKPQFSTSVYENEPAGTSVITMMATDQDEGHNGELTYSLEGPGVEAFHVDMDS
GLVTTQRPLQSYERFNLTVVATDGGDPPLWGTTMLLVEVIDVNDNRPVFVRPPNGTILHI
REEIPLRSNVYEVYATDKDEGLNGAVRYSFLKTAGNRDWEFFTIDPISGLIQTAQRLDRE
SQAVYSLILVASDLGQPVPYETMQPLQVALEDIDDNEPLFVRTPKGSPQYQLLTVPEHSP
HGTLVGNVTGAVDADEGPNAIVYYFIAAGNEEKNFHLQPDGRLLVLRDLDREREAIFSFI
VKASSNRSWTPPRGPYPTLDLVADLTLQEVRVVLEDINDQPPRFTKAEYTAGVATDAKVG
SELIQVLALDADTGNNSLVFYSILAIHYFRALANDSEDVGQVFTMGSVDGILRTFDLFMA
YSPGYFVVDIVARDLAGHNDTAIIGIYILRDDQRVKIVINEIPDRVRGFEEEFIHLLSNI
TGAIVNTDDVQFHVDKKGRVNFAQTELLIHVVNRDTNRILDVDRVIQMIDENKEQLRNLF
RNYNVLDVQPAISVRLPDDMSALQMAIIILAILLFLAAMLFVLMNWYYRTVHKRKLKAIV
AGSAGNRGFIDIMDMPNTNKYSFDGANPVWLDPFCRNLELAAQAEHEDDLPENLSEIADL
WNSPTRTHGTFGREPAAIKPDDDRYLRAAIQEYDNIAKLGQIIREGPIKLIQTELDEEPG
DHSPGQGSLRFHHKPPVELKGPDGIHVVHGSTGTLLATDLNSLPEDDQKGLGRSLETLTA
AEATAFERNARTESAKSTPLHKLHDVIMESPLEITEL
NT seq
5694 nt
NT seq
+upstream
nt +downstream
nt
atgcgagggccccggcccctggatcgggagcggaactcgtcccacgtgctgatagtggag
gcctacaaccatgacctgggccccatgcggagctccgtcagggtgattgtgtacgtggag
gacgtcaacgatgaggcccccgtgttcacacagcagcagtacagccgtctggggcttcga
gagaccgcaggcattggaacgtcagtcatcgtggtccaagccacagaccgagactctggg
gacggtggcctggtgaactaccgcatcctgtcgggcgcagaggggaagtttgagattgat
gagagcacagggcttatcatcaccatggattacctggactacgagaccaagaccagctac
gtgatgaatgtgtccgccactgaccaggccccacccttcaaccagggcttctgcagcgtc
tacatcactctgctcaacgagctagatgaggccgtgcagttctccaatgcctcatacgag
gctgccatcctggagaatctggcactgggttccgagattgtgcgggtccaggcctactcc
attgacaacctcaaccaaatcacgtaccgcttcgacgcctacaccagcgcccaggccaaa
gccctcttcaagatagatgccatcacgggtgtgatcacagtccagggcctggtggaccgt
gagaagggcgacttctataccttgacggtggtggcagatgacggcggccccaaggtggac
tccaccgtgaaggtctacatcactgtgctggacgagaatgacaacagcccccggtttgac
ttcacctctgactcggcagttagcgtacccgaggactgccctgtgggccagcgagtggct
actgtcaaggcctgggaccctgacgctggcagcaatgggcaggtggtcttctccctggcc
tctggcaacatcgcaggggcctttgagatggtcaccaccaatgactccattggtgaagtg
tttgtggccaggcctctggacagagaagagctggatcactacatcctcaaggttgtggct
tctgaccgaggcacccctccacggaagaaggaccacatcctgcaggtgaccatcctggac
atcaatgacaaccctccagtcatcgagagcccctttggatacaatgtcagtgtgaatgag
aacgtgggtggaggtactgctgtggtccaggtgagagccactgaccatgacatcgggatc
aacagtgttctgtcctactacatcaccgagggcaacaaggacatgaccttccgcatggac
cgcatcagcggtgagatcgccacacggcctgccccgcctgaccgcgagcgccagagcttc
taccacctggtggtcactgtggaggacgagggcacccccaccctgtcggccaccacgcaa
gtgtatgtgaccattgtggatgagaatgataacgcacccatgttccagcagccccactat
gaggtactgctggatgagggcccagacacgctcaacaccagcctcatcaccatccaggca
ctggacctggatgagggtcccaacggcacagtcacctatgccatcgtcgcaggcaacatc
atcaacaccttccgcatcgacagacacatgggtgtcatcaatgctgccaaagagctggac
tacgagatcagccacggccgctacaccctgatcgtcactgccacagaccagtgccccatc
ttatcccaccgcctcacctctaccaccacggtgcttgtgaatgtgaatgacatcaacgac
aacatgcctaccttcccccgggactatgagggaccatttgaagtcaccgagggccagccg
gggcccagagtgtggaccttcctggcccatgaccaagattcaggacccaacgggcaggtg
gagtacagcatcgtggacggagaccctctgggagagtttgtgatctctcctgtggagggg
gtgctgagggtccggaaggacgtggagctggaccgggagactatcgccttctacaacctg
accatctgtgcccgtgaccgggggatgcccccactcagctccacaatgctggtggggatc
tgggtgctggacatcaacgacaacgaccctgtgctgctgaacctgcccatgaacatcacc
atcagcgagaacagccccgtgtccagctttgtcgcgcacgtcctggccagtgacgctgac
agtggctgcaatgcacgcctcaccttcaacatcactgcgggcaaccgcgagcgggccttc
ttcatcaatgccacgacagggatcgtcactgtgaaccggcccctggaccgcgagcagatc
ccagagtacaagctgaccatttctgtgaaggacaacccggagaacccacgcatagccagg
agggattatgacttgcttctgatcttcctttctgatgagaatgacaaccaccccctcttc
actaaaagcacctaccaggcagaggtgatggaaaactctcctgctggatctgtaatggtg
aagtcccccatgaaccgggagctggttgccacctatgaggtcactctctcagtgattgac
aatgccagcgacctaccagagctctctgtcagtgtgccaaatgccaagctgactgtcaac
gtcctggacgtcaatgacaatacgccccagttcaagccctttgggatcacctactacacg
gagcggatcctggagggggccacccctgggaccacactcattgctgtggcagctgtggac
cctgacaagggccttaatgggctggtcacctacaccctgctggacctggtgcccccaggc
tatgtccagctggaggacccctcggcagggaaggtcattgccaaccagacagtggactac
gaggaggtgcactggctcaactttactgtgagggcctcagacaacgggtccccaccccgg
gcagctgagatccctgtctacctggagatcatggacatcaatgacaacaaccccatcttt
gaccagccatcctaccaggaggctgtctttgaggatgtgcctgtgggaacaatcatcctg
acagtcactgccactgatgctgactcaggcaactttgcactcattgagtacagccttgga
gatggagagagcaagtttgccatcaaccccaccacgggtgacatctatgtgctgtcttct
ctggaccgggagaagaaggaccactatatcctgactgccttggccaaagacaaccctggg
gatgtagccagcaaccgtcgtgaaaattcagtgcaggtggtgatccaagtgctggatgtc
aatgactgccggccacagttctccaagccccagttcagcacaagcgtgtatgagaatgag
ccggcgggcacctcggtcatcaccatgatggccactgaccaggatgaaggtcacaatgga
gagttgacctactcacttgagggccctggcgtggaggccttccatgtggacatggactcg
ggcctggtgaccacacagcggccactgcagtcctacgagaggttcaatctgaccgtggtg
gccacagatggcggagatcccccactctggggcaccaccatgctcctggtggaggtcatc
gacgtcaatgacaaccgccctgtctttgtgcgcccacccaacggcaccatcctccacatc
agagaggagattccgctgcgctccaacgtgtacgaggtctatgccacggacaaggatgag
ggcctcaacggggcggtgcgctacagcttcctgaagacggcgggcaaccgggactgggag
ttcttcaccatcgacccaatcagcggcctcatccagactgcacagcgccttgaccgcgag
tctcaggcggtgtacagcctcatcttggtggccagcgacctgggccaaccggtgccatac
gagactatgcagccgctgcaggtggccctggaggacatcgatgacaacgaacccctcttc
gtgaggactccaaaaggcagcccccagtaccagctgctgacagtgcctgagcactcacca
cacggcaccctcgtgggcaacgtgacaggcgcagtggatgcagatgagggccccaacgcg
atcgtgtactacttcatcgcagctggcaatgaagagaagaacttccatctgcagcccgat
gggcgtctgctggtgctgcgggacctggaccgggagcgagaagccatcttctccttcatc
gtcaaggcctccagcaatcgcagctggacacctccccgtggaccctacccaacccttgac
ctggttgctgacctcacgctgcaggaggtgcgcgttgtgctagaggacatcaacgaccag
ccgccacgcttcaccaaggctgagtacactgcaggggtggccaccgacgccaaggtgggc
tcagagttgatccaggtgctggccctggatgcagacactggcaacaacagccttgtcttc
tacagcattctggccatccactacttccgggcccttgccaacgactctgaagacgtgggc
caggtcttcaccatggggagcgtggacggcattctgcgcaccttcgacctcttcatggcc
tacagccccggctactttgtggtggacattgtggcccgagacctggcaggccacaacgac
acagccatcatcggcatctacatcctgagggatgaccagcgcgtcaagatcgtcattaac
gagatccccgaccgtgtgcgcggcttcgaggaggagttcatccacctgctgtccaacatc
actggggccattgtcaatactgacgatgtgcagttccacgtggacaagaagggccgggtg
aactttgcgcagacagagctgctcatccatgtggtgaaccgcgataccaaccgcatcctg
gacgtggaccgggtgattcagatgatcgacgagaacaaggagcagctgcggaatcttttc
cggaactacaacgtcctagacgtgcagcctgccatctctgtccggctgccggatgacatg
tctgccctgcagatggcgatcatcatcctggctatcctcctgttcctggccgccatgctc
ttcgtcctcatgaactggtactacaggactgtacacaagaggaagctcaaggccattgtg
gctggctcagctgggaatcgcggcttcatcgacatcatggacatgcctaacaccaacaag
tactcctttgatggagccaaccctgtgtggctggatcccttctgtcggaacctggagctg
gccgcccaggcggagcatgaggatgacctaccagagaatctgagtgagatcgccgacctg
tggaacagccccacgcgcacccacggaacttttgggcgtgagccagcagctatcaagcct
gatgatgaccgatacctgcgggctgccatccaagagtatgacaacattgccaagctgggc
cagatcattcgtgaggggccaatcaagctgatccagactgagctggacgaggagccagga
gaccacagcccagggcagggtagtctgcgcttccaccacaagccaccagtggagctcaag
gggcccgatgggatccatgtggtgcacggcagcacgggcacgctgctggccaccgacctc
aacagcctgcccgaggatgaccagaagggcctgggccgctcgctggagacgctgaccgct
gctgaggccactgccttcgagcgcaacgcccgcacagaatccgccaaatccacacccctg
cacaaacttcacgatgtgatcatggagagccccctggagatcacagagctgtga
DBGET
integrated database retrieval system
