Nocardioides marmotae: HPC71_20750
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Entry
HPC71_20750 CDS
T09088
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
nmar
Nocardioides marmotae
Pathway
nmar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPC71_20750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmar03019
]
HPC71_20750
Enzymes [BR:
nmar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HPC71_20750
Messenger RNA biogenesis [BR:
nmar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HPC71_20750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
tRNA_NucTran2_2
DUF6743
Motif
Other DBs
NCBI-ProteinID:
QKE03216
LinkDB
All DBs
Position
complement(4372333..4373829)
Genome browser
AA seq
498 aa
AA seq
DB search
MRTTLSVRPHLESSPVSDAPLPPLQLADVQRSVAEELDRIAPVIDELGRRFADAGHELSL
VGGPVRDAMLGRRHNDLDFTTSARPEQTERLLKGWADAIWDMGRAFGTIGCRRGPWQVEI
TTYRSEAYDPSSRKPDVDFGDSLDGDLGRRDFTVNAMAVRLPGRQVEDPYGGVVDLAHRV
LRTPGRPEDSFSDDPLRMMRAARFAAQLGFTVDDGVREAMTAMADRISIISAERVRDELV
KLVCAPYPRLGLTLLVETGLAALVLPELPALMLERDEHHRHKDVYEHTLTVLEQAIDLED
RLGGEPDFVSRFAALMHDVGKPRTRRFLDDGTVTFHHHDVVGAKITRKRMQALRFSNDEI
EAVTSLVELHLRFHGYGSGEWTDSAVRRYVRDAGDQLERLHVLTRADCTTRNQRKAARLA
RTYDELEERIARLSEQEELASIRPDLDGNQIMGILGIGPGREIGEAYRHLLELRMDHGPL
GEERAREELLAWWAARSA
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcggacgacactatccgtccgtccgcacctagaatcgtcccccgtgtccgacgctccc
cttcccccgctgcagctcgccgacgtccagcggtcggtggccgaggagctcgaccgcatc
gcgccggtgatcgacgagctcggccgccgcttcgccgacgccggtcacgagctgtccctc
gtcggggggccggtccgcgacgcgatgctcggccggcggcacaacgacctggacttcacc
acctccgcccgccccgagcagaccgagcggctgctcaagggctgggccgacgcgatctgg
gacatgggccgggccttcggcacgatcggctgccgccgcggaccctggcaggtcgagatc
acgacgtaccgctccgaggcctacgacccctcctcccgcaagcccgacgtcgacttcggc
gacagcctcgacggcgacctcggccgccgcgacttcacggtcaacgcgatggccgtccgg
ttgcccgggcgccaggtcgaggacccgtacggcggcgtggtcgacctcgcccaccgggtg
ctgcgcacgccgggccggcccgaggactccttctccgacgacccgctgcggatgatgcgg
gccgcacggttcgccgcgcagctgggcttcaccgtcgacgacggcgtccgcgaggcgatg
accgcgatggccgaccggatctcgatcatctctgccgagcgggtccgcgacgagctggtc
aagctggtctgcgcgccgtacccgcgactggggctgaccctgctggtggagaccgggctc
gcggcgctggtgctgccggagctgcccgcgctgatgctcgagcgcgacgagcaccaccgg
cacaaggacgtctacgagcacaccctgaccgtcctggagcaggcgatcgacctggaggac
cggctcggcggcgagccggacttcgtctcgcgcttcgccgcgctcatgcacgacgtcggc
aagccgcggacccgcaggttcctcgacgacggcacggtcaccttccaccaccacgacgtg
gtcggggcgaagatcacccgcaagcggatgcaggcgctgcgcttctccaacgacgagatc
gaggccgtcaccagcctcgtcgagctgcacctgcgcttccacggctacggctcgggtgag
tggaccgactccgcggtgcgccgctacgtgcgcgacgccggcgaccagctcgagcggctc
cacgtgctgacccgcgccgactgcacgacgcgcaaccagcgcaaggccgcgcgtctggcg
cgcacctacgacgagctcgaggagcggatcgcgcggctctcggagcaggaggagctggcc
tcgatccggcccgacctcgacggcaaccagatcatggggatcctcggcatcggccccggg
cgcgagatcggcgaggcctaccggcacctgctggagctgcggatggaccacggcccgctc
ggcgaggagcgcgcccgcgaggagctgctcgcctggtgggcggcgcgctcggcctga
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