Numida meleagris (helmeted guineafowl): 110399798
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Entry
110399798 CDS
T06015
Symbol
ERCC3
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPB subunit
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
nmel
Numida meleagris (helmeted guineafowl)
Pathway
nmel03022
Basal transcription factors
nmel03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nmel00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110399798 (ERCC3)
09124 Replication and repair
03420 Nucleotide excision repair
110399798 (ERCC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmel03021
]
110399798 (ERCC3)
03400 DNA repair and recombination proteins [BR:
nmel03400
]
110399798 (ERCC3)
Enzymes [BR:
nmel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
110399798 (ERCC3)
Transcription machinery [BR:
nmel03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110399798 (ERCC3)
DNA repair and recombination proteins [BR:
nmel03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110399798 (ERCC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_22
AAA_34
DUF2605
Motif
Other DBs
NCBI-GeneID:
110399798
NCBI-ProteinID:
XP_021254768
LinkDB
All DBs
Position
5:57878645..57895643
Genome browser
AA seq
780 aa
AA seq
DB search
MGRKERDKKKSKKRHYEEDEEEEDDAPGKESQEAVPSAAGKQVEDSGTKLDEYGAKDYRL
QMPLKADNASRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHIHEYKLTAYSL
YAAVSVGLQTSDITEYLQKLSKTGVPEGIIQFIKLCTVSYGKVKLVLKRNRYFVESTHPD
VIQQLLQDHIIRDCRLRNAEGEETELITETFTSKPAISKSSESGFGPSTSQEADVQNKPD
VPADLFEFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLDYPLLAEYDFRNDSVN
PDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLV
LGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIDCSIAISTYSMLGHTTKRSWEA
ERVMEWLKSREWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFL
IGPKLYEANWMELQNSGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRA
CQFLIKFHERRNDKIIVFADNVFALKEYAIRLGKPYIYGPTAQGERMQILQNFKHNPKIN
TIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLV
SQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEEEELSFSSKEEQQQLLQKVLQASDLD
AEEEVVAGEYGSKSVQMSRRTGTMSSMSGADDTVYMEYQSSRSKASSNKHIHPLFKRFRK
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaaggagcgggacaagaagaagtctaagaagcggcactacgaggaggacgag
gaggaggaggatgacgctcccgggaaggagtcgcaggaggccgtgccgtcggcggcgggg
aagcaggtggaggacagcggcaccaagctggacgagtacggcgccaaggactaccggctg
cagatgccgctgaaggccgacaacgcctcgcggcctctctgggtggctcctgatggccat
attttcctggaagccttttctccagtttacaaatatgcacaggattttttggttgccatt
gctgagcctgtgtgcagaccaacccacattcacgagtacaagctgactgcttactccctg
tacgccgccgtcagcgtcggcttgcagacaagcgatatcacagagtacttgcagaaactg
agcaagactggtgtcccagagggaatcattcagttcataaagctgtgtaccgtcagctat
gggaaggtgaagctggtgctgaaacgcaacaggtattttgtggaaagtacccatcctgat
gtcattcagcagcttctgcaagaccacattattagagactgtcgcctgagaaatgctgaa
ggtgaagaaacagagctcattacagagacattcacaagtaaaccagcgatttccaagtcc
agtgaaagcggctttggtccatcaacatcacaagaagcagatgttcaaaacaagccggat
gtcccagctgacttatttgagttttatgagcagatggacaaagatgaggaggaggaggag
gaaacgcagacagtatcttttgaagtcaagcaggagatgattgaagaacttcagaagcgt
tgtatccatttggactaccccttgctggcagaatatgatttcagaaatgattctgtgaat
cctgatattaatatagatctgaaacctacagctgtcctcagaccctatcaagagaaaagc
ctgaggaagatgtttggaaatgggcgagccagatctggtgttattgtcttgccatgtggt
gctggcaagtccctagttggagtgacagctgcatgtactgtccgcaagaggtgtctggtc
cttggtaattctgcagtgtctgtagaacagtggaaggcgcagttcaagatgtggtccact
atcgatgacagtcagatctgtcggttcacctctgatgccaaagacaagcccattgattgt
tctattgctatcagcacgtattccatgttgggacacacgactaaaagatcctgggaagca
gagagagtaatggagtggcttaaaagtcgagagtggggccttatgatacttgatgaagta
catactatccctgcaaaaatgttcagacgtgtgctcactattgtacaagctcattgtaaa
ctgggactgactgctaccctggtcagagaagatgataaaattgttgatctgaacttcctg
atcggaccaaagctctatgaggccaactggatggagctgcagaacagtggctacattgct
aaagtccaatgtgctgaggtttggtgcccaatgtcacctgaattttatagagaatacgta
gcaatcaaaacaaagaaacggatactgctgtacaccatgaacccaaataagttcagagct
tgccagttcctgattaaattccatgagcgacggaatgataaaatcattgtttttgctgac
aatgtatttgcactgaaggaatatgcaatcagacttgggaaaccatatatatatggtcct
actgcacaaggagaaagaatgcaaattctacaaaacttcaagcacaacccaaaaatcaac
actattttcatttcaaaggtgggtgacacatcctttgatctacctgaagccaatgttctg
attcagatttcgtcccatggtgggtctcgaagacaggaggctcaaagactggggcgagta
ctgagagccaaaaaaggcatggttgcagaggaatacaatgcctttttttattctcttgta
tcccaagacactcaggaaatggcatattcaacaaagcgacaacggtttctcgtagatcaa
ggctacagcttcaaggtaataacaaagcttgcaggcatggaagaagaagaactttcattt
tcatccaaagaagaacagcagcaacttctccagaaagtcctgcaagcatctgacctagat
gctgaggaggaggtagttgctggagaatatggttcaaagtcagttcagatgtcacgtcgt
acaggcacaatgagctctatgtcaggagcagatgatacagtttatatggaatatcagtca
tctcggagtaaggcatcttcaaataaacacatccatccactatttaagcgcttccggaaa
tga
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