Candidatus Nitrospira neomarina: PQG83_09430
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Entry
PQG83_09430 CDS
T09428
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
nneo
Candidatus Nitrospira neomarina
Pathway
nneo02020
Two-component system
nneo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nneo00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PQG83_09430
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PQG83_09430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
nneo02022
]
PQG83_09430
Two-component system [BR:
nneo02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
PQG83_09430
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
HTH_8
AAA
Mg_chelatase
FleQ
UPF0175
MCM
AAA_16
nSTAND3
DUF6031
GIT1_C
TsaE
Motif
Other DBs
NCBI-ProteinID:
WNM63960
UniProt:
A0AA96JY99
LinkDB
All DBs
Position
complement(2156502..2157902)
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AA seq
466 aa
AA seq
DB search
MADERILVVDDDPSLLTLLKMRLHSMGFVVTACGSGGDALSRVQEDPYDFAILDLRLPDA
DGLDLMEELHQHQTNLPILILTAHGCIPNAVEAMKKGAYGYLTKPFDDKELLESIDKALT
TKRMSQEIHRLQLLVNELYGLENVVARSAEMHTVLKQVAQVAKTDTTVCISGETGTGKEV
IARVLHCNSPRASKPFMAVNCAAIPETLFESELFGHMKGSFTGAHQNKRGLIQSADKGTL
FLDEIGEMPLSLQGKLLRAIQNREVVPVGGQVPVKVDVRILAATNKDLELAVREGRFRED
LYYRIHVVPLWIPPLRQRREDIPSLAQFFLKRSIEHHGKIVKGFSPEAMQALITYPWPGN
VRELENMIERAVVMSPQEIITAEFLALSPQEQSKPGGLQPLTDAKEAFEKEYLQDLLKAT
QGNISKAAQIAGRYRADFYKLLKKYGLHPSDRQEDASSSNGQPGLQ
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaacgaattcttgttgttgatgacgatccgagtttactgaccctcctgaaa
atgcgcttgcattccatgggatttgtggtgacggcgtgtggctccgggggggatgccttg
agccgggttcaggaagatccctatgattttgccattctggatcttcgattgccggatgct
gacggcttggatctgatggaagaattgcatcagcatcaaacgaatcttccaatcctgatt
ttaacggcgcatggctgtattcctaatgcggtggaagccatgaaaaagggtgcgtatggg
tatttaaccaaaccgtttgatgacaaagagttgctggagagtattgataaagccctcacg
accaaacgaatgagtcaggaaattcatcgactacaactgcttgtgaacgaattatatggg
cttgaaaatgtcgtggcccggagtgcagaaatgcatacagtgttgaagcaggtggcgcaa
gtggcgaagaccgataccaccgtctgtatttccggagaaaccggaacagggaaagaagtt
attgcgcgcgtgctccattgtaatagccctcgagcttcgaaaccctttatggccgtcaat
tgtgcagctattccagaaacgttgttcgaaagtgagttgttcgggcatatgaagggttcc
tttaccggggcccatcaaaataaaagaggattaatccaaagtgctgataagggaacctta
tttttagatgaaatcggtgaaatgcctttgtcattacagggcaaactcttgcgggccatt
caaaatcgagaggtggtgcccgtcggagggcaagtgcccgtgaaagtggatgtgagaatt
ctggctgcaaccaataaggatctggagttagccgttcgagaaggacgatttcgagaagat
ctgtattatcggattcatgttgtgcctttgtggattcctccgcttcggcaaagacgagag
gatattccttctctcgcccagttttttctcaaacggagcatagagcatcatggtaaaatc
gtcaaaggattttccccggaagccatgcaggccttaattacgtatccttggccagggaat
gttcgagaacttgagaatatgattgaacgtgcggttgtcatgtctcctcaagaaattatc
acggcagaattccttgcactttctccacaagaacaaagcaagccaggtggtcttcagcca
ttaaccgatgcgaaagaggcatttgaaaaggagtaccttcaagatttgctgaaagccaca
caaggaaacatctctaaggcggcacaaattgccgggcgctatcgggcagacttttataaa
ctgctcaaaaaatacggactgcatccctccgataggcaggaagatgcgtcttcttcaaac
ggccaaccaggactccagtaa
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