Nipponia nippon (crested ibis): 104016258
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Entry
104016258 CDS
T05756
Symbol
MED16
Name
(RefSeq) LOW QUALITY PROTEIN: mediator of RNA polymerase II transcription subunit 16
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
nni
Nipponia nippon (crested ibis)
Brite
KEGG Orthology (KO) [BR:
nni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nni03021
]
104016258 (MED16)
Transcription machinery [BR:
nni03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
104016258 (MED16)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
104016258
NCBI-ProteinID:
XP_009467377
LinkDB
All DBs
Position
Unknown
AA seq
834 aa
AA seq
DB search
MDLAYVCEWEKKPKSNHCPSIPLVCAWSCRNLIAFTTDLKNEEEKDLTTWSHHMVHIIDT
EHPWDVYSVNSGHAEVITCLEWDQSGSRLLSADADGHIKCWSMTDHLANSWENTVGSMVE
GDPVVALSWLHNGVKLALHVEKSGASNFGEKFSRVKFSPSLTLFGGKPMEGWIAVTISGL
VTVSLLKPNGQVLTSTESLCRLRCRVALADVAFTGGGNIVVATSDGSSTSPVQFYKVCVS
VVNEKCKIDTEILPSLFMRCTTDPARKDKYPAITHLKFLARDMSEQVLLCASNQNSSIVE
CWSLRKEGLPVNNIFQQISPVVGDKQPMILKWRILSATNDLDRVSAVALPKLPISLTNTD
LKVANDTKFFPGLGLALAFHDGSVHIVHRLSLQMMAVFYGSSSQRPVDEQTIKRQRTAGP
LVHFKAMQLSWTSLALAGIDSHGKLSMLRISPSMGHVLDMNMSLRHLLFLLEYCMVTGYD
WWDILLHVQPNMVQNLVEKLHEEYMRQNAALQQVLSTRIVAMKASLCKLSSSTIARVCDY
HAKLFLIAISCTLKSLLRPHFLNTPDKSPGDRLTEICSKITDIDIDKVMINLKTEEFVLE
MTTLQSLQQLIQWVGDFVLYLLASLPNQGSPVRPGHSFLRDGASLGMFRELMVVIRIWGL
LKPSCLPVYTATSDTQDSMSLLFRLLTKLWLCCREENHITEPDDTLIDECCLLPSQLLIP
NIDWLPINDGIISKLQNKQLVRLQFGKAPGLVGHTVSSQFDAFVRAPGQPKIDHLRRLHL
GAYPTEECKSCTRCGCVTMLKSPNKVTAVKQWEQRWIKNCLCGGLWRRMPLSYP
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggacctggcgtacgtctgcgagtgggagaagaagccgaaaagcaaccactgcccgtcc
attcccttggtgtgcgcctggtcctgccgcaacctcatcgctttcaccacagacctcaaa
aacgaggaggaaaaagatctcactacatggtcacatcacatggtccatatcatcgacacc
gagcacccgtgggacgtctattccgttaactctggccacgctgaagtcatcacttgtttg
gagtgggatcagtcaggctccaggctgctctcggcagacgcggacggccacatcaagtgc
tggagcatgactgatcacttggccaacagctgggagaacacggtgggcagtatggtggaa
ggggacccggttgtggccctgtcctggctgcacaacggcgtgaagctggccctgcacgtg
gaaaagtctggagcatcgaactttggtgagaagttttccagggtcaagttctctccctcg
ctgacgctgtttggcgggaagcccatggagggctggattgctgtcaccatcagtgggctg
gtgacggtctctctcctcaagcccaacgggcaggtgctgacgtccacagagagcctgtgc
cgcctccgctgccgcgtcgccttggcagatgttgccttcactggtggggggaacatcgtg
gtggccacgtcggatggcagcagcacctcccccgtccagttctacaaagtctgcgtcagc
gtggtgaatgagaagtgcaaaatagacaccgaaatcctgccttccctcttcatgcgctgc
accacggaccctgcccgcaaagacaaatacccagcaatcactcacctgaaattccttgct
cgggacatgtcagagcaggtgctgctttgtgcttccaaccaaaacagcagcatcgtggag
tgctggtctctgcggaaagagggcttgccagtcaataatatctttcagcaaatctcccct
gtggttggagacaagcaacccatgatactgaaatggcgaattctttctgccaccaatgac
ttggatcgggtttcggctgtggctctgccgaagttgccaatctccctgaccaatactgat
ctcaaggtggcaaatgacaccaaattcttccctggattgggtctggctttggcttttcac
gatggcagcgtccacattgttcatcgcctgtccttgcaaatgatggctgtcttctacggc
tcttcctcccagcgcccggtggacgagcagaccatcaaaaggcagcgaactgctggtccc
ctggttcacttcaaagccatgcagctctcctggacgtctctggccttggctggcattgac
agtcacgggaagctgagcatgcttcgtatctccccctccatgggccatgtgctggacatg
aacatgtccctccgtcacttgctgttcctgttggagtattgcatggtgactggctacgac
tggtgggacatcctgctccacgtccaacccaacatggtccagaacctggtggagaagctg
cacgaagagtatatgcgccagaatgcggccctgcagcaggtcctctccacgcgcattgtt
gccatgaaggcctctctctgcaagctctcctccagcacgatagcccgtgtgtgtgactac
cacgcgaagctgttcctgattgccattagctgcaccttgaaatcgctgctacgcccacac
ttcctgaacaccccggacaagagtcccggggaccgactcaccgagatctgctccaagatc
acggatatagacattgacaaggtgatgattaacttgaagacggaagagtttgtcctggag
atgaccacgttgcagtccctgcagcagctcatccagtgggtgggagatttcgtgctctat
ctgctggccagccttcctaaccagggctcccctgtgcggccgggacacagctttctgcga
gacggagcgtccttgggcatgttcagggagctgatggtggtgatccgtatctggggactg
ttgaagccgagctgcctccccgtctacacagcgacctccgacacccaggacagcatgtcc
ctcctcttcaggctcctgactaaactctggctgtgctgtcgtgaggaaaatcacataacg
gagccagatgataccctgatagacgaatgttgccttctgcccagccagttgctcattccc
aatattgactggttgcccatcaacgatggcattatcagcaagctgcagaacaaacagctc
gtccggctgcagtttgggaaagctcctgggctcgttggtcacactgtctcgtcccagttc
gatgcctttgtcagggcgcctggacagcccaaaattgatcacctgaggcggcttcatttg
ggagcatacccaacggaggaatgcaagtcatgcaccaggtgtggctgtgtcacgatgctg
aaatcgccaaacaaagtcaccgcggtgaagcagtgggagcagcgctggatcaaaaactgc
ttgtgcggggggctgtggaggaggatgcccctcagctacccctga
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