KEGG   Nelumbo nucifera (sacred lotus): 104593108
Entry
104593108         CDS       T04131                                 
Name
(RefSeq) histone deacetylase 6-like
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
nnu  Nelumbo nucifera (sacred lotus)
Pathway
nnu03082  ATP-dependent chromatin remodeling
nnu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:nnu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    104593108
   03083 Polycomb repressive complex
    104593108
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:nnu03036]
    104593108
Enzymes [BR:nnu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     104593108
Chromosome and associated proteins [BR:nnu03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     104593108
   HDAC complexes
    Sin3A-HDAC complex
     104593108
    BRAF-HDAC complex
     104593108
    REST complex
     104593108
    SHIP complex
     104593108
    MiDAC complex
     104593108
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     104593108
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    104593108
  Chromatin remodeling factors
   NuRD complex
    104593108
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 104593108
NCBI-ProteinID: XP_010251099
UniProt: A0A1U7ZC12
LinkDB
Position
Un
AA seq 467 aa
MENASGSASLPGGPDAKKRRVCYFYEPSIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRR
MEVNRPYLAGPDDIRRFHSDDYVDFLASVTPETLHDHTHARHLKRFNVGEDCPVFDGLFA
FCQASAGGSIGAAVKLNRGDADIALNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVNR
RVLYVDIDIHHGDGVEEAFFTTDRVMTVSFHKFGDFFPGTGHLKDIGAGPGKYYALNVPL
NDGMDDESFRGLFQPIIQKVMEIYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFL
RSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHIEPS
NMENQNSPKDLERMRNVLLGQLSRIQHAPSVQFQAQPPSTQVPEEGEDVMDQRSKCRIWN
GEDYGSESEEDEKPQRDKSVIVDQSKSNLGVRDVKIDTNEERKSMEE
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggagaatgcgtcggggagcgcttctctcccaggagggccagacgcgaagaagcggagg
gtgtgctacttctacgagccttcaatcggagactactactacggacagggccacccaatg
aagccccatcggatccgtatggctcacaacctcatagtccactactctcttcaccgtcgt
atggaggtcaaccgcccttatcttgccggtcctgatgacatccgccgcttccactccgac
gattacgtcgacttcctcgcatccgtaacacccgagactctccacgaccacacacacgcc
cgccacctcaagcgcttcaacgtcggcgaggactgccccgttttcgacggcttgtttgcc
ttctgtcaggcgtccgccggaggatcaattggtgccgctgttaagttgaaccgcggggat
gcagatattgccttgaattgggcgggtggattgcatcacgcgaagaagagtgaggcctct
ggcttctgttatgtcaatgatatcgttctggggattcttgagcttctcaaggtgaacagg
cgtgtactgtatgtagatattgacattcatcatggagatggtgttgaggaggcatttttc
accactgacagggttatgacagtgtctttccataaatttggggacttctttcctgggact
gggcatcttaaggacattggagcaggccctgggaagtattatgctctcaatgtcccactg
aatgatggaatggatgatgagagttttaggggactatttcagcccatcattcaaaaagtc
atggaaatctatcagccagatgcagttgttctgcagtgtggtgcggattctttatctggt
gacaggttaggttgcttcaacttgtcagtgaagggccatgcagactgtcttcgctttctc
agatcctttaatgtccctctgatggtcttgggcggtggaggatatacaatccgtaatgtt
gctcgttgctggtgctatgagacagcagttgctgtgggggtagaacctgacaataaactt
ccttacaatgaatattatgagtactttggccctgattatactctccatattgaaccaagc
aacatggagaatcaaaactcgccaaaagatttggaaagaatgagaaatgtacttttgggt
cagctttcaagaatacagcatgctcccagtgtacagtttcaggcacaacctccaagtacc
caagttcctgaggagggagaagatgtcatggatcaaaggtcaaaatgtcgcatttggaat
ggtgaagactatgggtctgaatctgaagaggatgaaaagcctcaacgtgataaatccgtc
attgttgatcagtcaaagtcaaacttgggcgtcagagatgtcaaaatcgacaccaacgag
gaaagaaagtcaatggaagaatag

DBGET integrated database retrieval system