Nelumbo nucifera (sacred lotus): 104593108
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Entry
104593108 CDS
T04131
Name
(RefSeq) histone deacetylase 6-like
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
nnu
Nelumbo nucifera (sacred lotus)
Pathway
nnu03082
ATP-dependent chromatin remodeling
nnu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
nnu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
104593108
03083 Polycomb repressive complex
104593108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nnu03036
]
104593108
Enzymes [BR:
nnu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
104593108
Chromosome and associated proteins [BR:
nnu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
104593108
HDAC complexes
Sin3A-HDAC complex
104593108
BRAF-HDAC complex
104593108
REST complex
104593108
SHIP complex
104593108
MiDAC complex
104593108
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
104593108
Heterochromatin formation proteins
Other heterochromatin formation proteins
104593108
Chromatin remodeling factors
NuRD complex
104593108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
104593108
NCBI-ProteinID:
XP_010251099
UniProt:
A0A1U7ZC12
LinkDB
All DBs
Position
Un
AA seq
467 aa
AA seq
DB search
MENASGSASLPGGPDAKKRRVCYFYEPSIGDYYYGQGHPMKPHRIRMAHNLIVHYSLHRR
MEVNRPYLAGPDDIRRFHSDDYVDFLASVTPETLHDHTHARHLKRFNVGEDCPVFDGLFA
FCQASAGGSIGAAVKLNRGDADIALNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVNR
RVLYVDIDIHHGDGVEEAFFTTDRVMTVSFHKFGDFFPGTGHLKDIGAGPGKYYALNVPL
NDGMDDESFRGLFQPIIQKVMEIYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFL
RSFNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYYEYFGPDYTLHIEPS
NMENQNSPKDLERMRNVLLGQLSRIQHAPSVQFQAQPPSTQVPEEGEDVMDQRSKCRIWN
GEDYGSESEEDEKPQRDKSVIVDQSKSNLGVRDVKIDTNEERKSMEE
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggagaatgcgtcggggagcgcttctctcccaggagggccagacgcgaagaagcggagg
gtgtgctacttctacgagccttcaatcggagactactactacggacagggccacccaatg
aagccccatcggatccgtatggctcacaacctcatagtccactactctcttcaccgtcgt
atggaggtcaaccgcccttatcttgccggtcctgatgacatccgccgcttccactccgac
gattacgtcgacttcctcgcatccgtaacacccgagactctccacgaccacacacacgcc
cgccacctcaagcgcttcaacgtcggcgaggactgccccgttttcgacggcttgtttgcc
ttctgtcaggcgtccgccggaggatcaattggtgccgctgttaagttgaaccgcggggat
gcagatattgccttgaattgggcgggtggattgcatcacgcgaagaagagtgaggcctct
ggcttctgttatgtcaatgatatcgttctggggattcttgagcttctcaaggtgaacagg
cgtgtactgtatgtagatattgacattcatcatggagatggtgttgaggaggcatttttc
accactgacagggttatgacagtgtctttccataaatttggggacttctttcctgggact
gggcatcttaaggacattggagcaggccctgggaagtattatgctctcaatgtcccactg
aatgatggaatggatgatgagagttttaggggactatttcagcccatcattcaaaaagtc
atggaaatctatcagccagatgcagttgttctgcagtgtggtgcggattctttatctggt
gacaggttaggttgcttcaacttgtcagtgaagggccatgcagactgtcttcgctttctc
agatcctttaatgtccctctgatggtcttgggcggtggaggatatacaatccgtaatgtt
gctcgttgctggtgctatgagacagcagttgctgtgggggtagaacctgacaataaactt
ccttacaatgaatattatgagtactttggccctgattatactctccatattgaaccaagc
aacatggagaatcaaaactcgccaaaagatttggaaagaatgagaaatgtacttttgggt
cagctttcaagaatacagcatgctcccagtgtacagtttcaggcacaacctccaagtacc
caagttcctgaggagggagaagatgtcatggatcaaaggtcaaaatgtcgcatttggaat
ggtgaagactatgggtctgaatctgaagaggatgaaaagcctcaacgtgataaatccgtc
attgttgatcagtcaaagtcaaacttgggcgtcagagatgtcaaaatcgacaccaacgag
gaaagaaagtcaatggaagaatag
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