Noviherbaspirillum sp. UKPF54: FAY22_00755
Help
Entry
FAY22_00755 CDS
T06116
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nok
Noviherbaspirillum sp. UKPF54
Pathway
nok03030
DNA replication
nok03430
Mismatch repair
nok03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FAY22_00755 (dnaE)
03430 Mismatch repair
FAY22_00755 (dnaE)
03440 Homologous recombination
FAY22_00755 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nok03032
]
FAY22_00755 (dnaE)
03400 DNA repair and recombination proteins [BR:
nok03400
]
FAY22_00755 (dnaE)
Enzymes [BR:
nok01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FAY22_00755 (dnaE)
DNA replication proteins [BR:
nok03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FAY22_00755 (dnaE)
DNA repair and recombination proteins [BR:
nok03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FAY22_00755 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Mrr_cat
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QDZ26624
UniProt:
A0A5B8N2D9
LinkDB
All DBs
Position
161737..165189
Genome browser
AA seq
1150 aa
AA seq
DB search
MTTPQFIHLRLHSEYSIVDGLVRIDDVVKAAAKDSQPALAISDLANLFGMVKFYKAARGK
GVKPVAGCDVWITNDADRDKPSRLLLLVKNRTGYLQLCELLSKAWLTNVHRGRAEIRTEW
LENGASSELIALSGAHSGDVGMAIDNGNIAVAERCAERWSDIFPNRFYVEIQRYGQPNMD
NHVRQAVALASRLKLPVVATHPIQFLTPEEFIAHEARTCIAEGEILANQRRVKRFNEQQC
FKTQAEMAELFADLPAALQNSIEIAKRCNLQLELGKPKLPLFPTPDGMSLDDFLVQQTKI
GLEERLVQLFPDEAKREANRARYEERLKFENDTIIKMKFPGYFLIVADFIQWGKNNGVPV
GPGRGSGAGSLVAYALKITDLDPLAYNLLFERFLNPERVSMPDFDIDFCQENRDRVIQYV
KDRYGRDAVSQIATFGTMAAKGAVRDVGRVLDMGYNFCDGISKLIPFKPGKLVTIADAIE
EEPLLKERMEKEEEVKQILDLAQQVEGITRSIGMHAGGVLIAPGKLTDFCPLYTQGGDAG
VVSQYDKDDVEAVGLVKFDFLGLTTLTILDRAVNYIKMLDPSMADFDLAKLPLNDRASYE
LLTKAKTVAVFQLESRGMQGMLKDARPDRFEDIIALVALYRPGPMDLIPDFCKRKHGEKF
DYPDPRTEGILSETYGIMVYQEQVMQMAQVIGGYSLGGADLLRRAMGKKKAEEMAEHRQI
FREGAAKNGLTQEKADEIFDLMEKFAGYGFNKSHAAAYALLSYHTAYLKAHHPAAFMAAN
MSLAMDDTDKIKILVEDSIDICKLQILPPDINLSHYRFMPVGEPGKKATQIRYGLGAVKG
SGQNAIEAIIAARETGGPFTDLFDFVKRVDKRQINRRTIEALIRAGAMDCFKVDRGILLA
SVNFAMECAEQAHASANQVSLFGGDASDLETPPEYLKVPPWSDKQRLTEEKTALGFYLSG
HLFNSYADEVRKFVKTKLANLEPSRDARLMAGIITAVRVQMTQRGKMVVVTLDDNTATVD
VTVFNELYDPNRHLFKEDEFLAVQGKVSEDRFSGGLRVSAEKVMDIAMARVAFGKQFAFS
LEARLDALQMKNVLAPYRSETGLPLTMRYLQQGVGYCEIRLADDWRVAPADGLKQTLAEK
LGVQGAMVEY
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaccgcaattcatccatcttcgcctccattccgaatactcgatcgtcgacggc
ctcgtgcgcatcgacgatgttgtcaaagccgcagcaaaagacagccagccggcgctcgcg
atctccgatctggccaatctgtttggcatggtcaagttctacaaggctgcgcgcggcaag
ggcgtcaagccggtcgccggctgtgacgtctggatcaccaacgatgccgaccgcgacaag
ccgtcgcgtcttttgttgctggtaaagaatcgcaccggctatttgcaattgtgtgaattg
ctgagcaaggcctggctgaccaacgtgcatcgcggacgcgcggagatccggaccgagtgg
ctggaaaacggcgcgtccagcgaattgatcgcgctatcgggcgcgcattccggagatgtc
gggatggcgatcgacaacggcaacatcgcggtggccgagcgctgcgccgagcgctggtcg
gacatttttccgaatcgcttctacgtcgagatccagcgctacggccagcccaacatggac
aaccatgtgcggcaagcggtggcgctggcgtcgcgcctgaagctgccggtggtggcgacc
catccgatccagttcctgacgccggaggaattcatcgcgcacgaggcgcgcacctgtatc
gcggagggcgaaatcctcgccaaccagcgccgcgtcaagcgcttcaacgagcagcagtgc
ttcaagacccaggccgagatggccgagctgttcgccgacctgccggcggcgctgcaaaac
tcgatcgagatcgccaagcgctgcaacctgcagctcgaactaggcaagccgaagctgccg
ctgtttccgacgccggacggcatgtcgctcgacgatttcctggtgcagcagaccaagatc
gggctggaagagcgtctggtccaattgttccccgacgaggctaagcgcgaagcgaaccgc
gcgcgctacgaggagcgcctgaagttcgagaacgacaccatcatcaagatgaagtttccc
ggctacttcctgatcgtggcggacttcatccagtggggcaagaacaacggtgtgccggtc
ggaccgggccgcggctccggcgcaggttcgctggtggcgtacgcgctgaagatcaccgac
ctcgatccgctcgcctacaacctgctgttcgagcgtttcctgaatcctgaacgcgtatcg
atgcctgacttcgatatcgacttttgccaggaaaaccgcgaccgcgtgatccagtacgtg
aaggaccgctacgggcgcgacgcggtgtcgcagatcgcgaccttcggcaccatggctgcg
aagggcgcggtgcgcgacgtgggccgcgtgctcgacatgggctacaacttctgcgacggt
atctcgaaactgatcccgttcaagccgggcaagctggtgaccattgccgacgcgatcgag
gaagagccgctgctgaaggagcgcatggaaaaggaagaggaggtcaagcagatcctcgac
ttggcccagcaggtcgaaggcatcacgcgctcaatcggcatgcacgccggcggcgtgctg
atcgcgcccggcaagctgaccgatttctgtccgctctacacgcagggcggcgacgccggc
gtggtgtcgcagtacgacaaggacgatgtggaagcggtgggtctcgtgaagttcgacttc
ctgggcctgaccacgctgactatcctcgaccgggcggtgaactacatcaagatgctcgac
ccgtcgatggcggacttcgatctggccaagctgccgctgaacgacagggcatcctacgag
ctgctcaccaaggccaaaacggtcgccgtgttccagcttgaaagccgcggcatgcagggc
atgctcaaagacgcgcgtcccgaccgtttcgaagacattatcgcgctggtggcgttgtac
cgtccgggcccgatggacctgattccggatttctgcaagcgtaagcacggcgagaagttc
gactatcccgatccgcgtaccgagggcatcctgtccgaaacctacggcatcatggtgtat
caggagcaggtgatgcagatggcgcaggtgatcggcggctactcgctcggcggcgcagac
ttgctgcgccgcgcgatgggcaagaagaaggcggaagaaatggccgaacatcgccagatc
ttccgcgaaggcgcggccaagaacgggctgacgcaggagaaggccgacgagatcttcgac
ttgatggagaagttcgcgggctacggcttcaacaagtcgcacgccgccgcctatgcattg
ctgtcgtatcacaccgcctacctgaaggcgcatcatcccgccgcgttcatggcagccaac
atgtcgctggccatggatgacaccgacaagatcaagatcctcgtcgaggactcgatcgat
atctgcaaattgcagattctgccgccggatatcaacctgtcgcactaccgcttcatgccg
gtgggcgagccgggcaagaaggccacgcagatccgctacggcctgggtgccgtcaagggc
agcgggcagaatgcgatcgaggcgatcattgccgcccgcgagaccggcgggccgtttacg
gacctgttcgacttcgtcaagcgcgtcgacaagcgccagatcaaccgccgcacgatcgag
gcgctgatccgtgccggcgcgatggactgcttcaaggtcgatcgcggcatcctgctggcg
tcggtcaacttcgcgatggagtgcgcggaacaggcgcatgcgtcggccaaccaggtcagc
ctgttcggcggcgacgccagcgacctggaaacgccgccggaatacctgaaggtgccgcct
tggagcgacaagcagcgcctgaccgaagaaaagaccgcgctcggcttttacctgtccggc
cacctcttcaattcgtatgcggacgaggtgcgcaagttcgtcaagaccaagctggcaaac
ctggagccgtcgcgcgacgcgcgcctgatggcggggatcatcaccgccgtgcgggtgcag
atgacccagcgcggcaagatggtggtggtgacgctggacgataataccgccacggtcgac
gtgacggtgttcaacgagctgtacgatccgaaccggcatctcttcaaggaagacgaattc
ctcgcggtgcagggcaaggtctcggaggaccgcttttccggtggcctgcgcgtgagcgcc
gagaaggtgatggatatcgcgatggcgcgcgtggcgttcggcaagcagttcgcgttttcg
ctggaggcgcgcctcgacgcgctgcagatgaagaatgtgctcgccccctatcgttcggag
accggcttgccgctcacgatgcgctacctgcagcagggcgtcggctattgcgaaatccgg
ctcgcggacgactggcgggtggcgccggccgacggcttgaagcagacgctggccgagaag
ctgggcgtgcagggggcgatggtggagtattga
DBGET
integrated database retrieval system
