Noviherbaspirillum sp. UKPF54: FAY22_03050
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Entry
FAY22_03050 CDS
T06116
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nok
Noviherbaspirillum sp. UKPF54
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nok03016
]
FAY22_03050 (truB)
Enzymes [BR:
nok01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FAY22_03050 (truB)
Transfer RNA biogenesis [BR:
nok03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FAY22_03050 (truB)
Prokaryotic type
FAY22_03050 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QDZ27028
UniProt:
A0A5B8N312
LinkDB
All DBs
Position
653636..654568
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AA seq
310 aa
AA seq
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MAQALPKKIRVPVHGVLLLDKAAGHSSNDVLIKAKRLLNAQKAGHTGTLDPFATGLLPLC
FGEATKFAQDLLDADKTYETVVHLGVTTATGDTEGEVIETREVDVTLERIEAVLARFRGD
IDQVPPMHSALKRDGKPLYEYARAGVTLEREARRVTIHTLELLDYRAPYLKLRVRCSKGT
YIRVLGQDIGAALGCGAHLQALRRTQVGALSLDAAVTLEQLMDTAEAERETRLAPVDALL
STFPAVSLSDELARRFLHGQRLALGREGYGRLEQGRVRVYRESDRSLLGTAQLVEFGVLA
PERLIATGTH
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagcattgcccaagaaaatacgcgtgccggtgcacggcgttttattactcgac
aaggctgctggccactccagcaacgacgtgctgatcaaggccaagcgcctgctcaacgcg
caaaaggcggggcacaccggtaccctcgatccgtttgcgaccggcttgctgcccctttgt
tttggcgaggccaccaagtttgcgcaggatttgctcgacgcagacaagacgtacgagacg
gtggtgcatctgggtgtgacgacagcgactggcgacaccgaaggcgaggtcatcgaaacg
cgcgaagtcgacgtgacgctggagcggatcgaagcagtcctggcgcgatttcgcggcgac
atcgaccaggtgccgccgatgcattcggccttgaagcgcgacggcaagccgctctacgag
tacgcgcgcgccggcgtgacgctcgagcgcgaggcgcgccgggtgacgatacacacgctg
gaattgctcgattaccgggcgccatatctgaagttgcgcgttcgttgcagcaaaggaacc
tatatccgcgtgctggggcaggatatcggcgccgcgctcggctgcggcgcgcatttgcag
gcgctgcggcgaacgcaagtaggggcgctgagccttgacgccgcagtcactcttgaacaa
ttgatggatacggccgaagcggagcgcgagacacggctggcgccggtcgatgccttgctt
tcaacgtttccggcggtatcgctatccgacgaactggccaggcgttttttgcatggccag
cgtcttgccctaggccgggaagggtatggccggctggagcaaggccgggtgcgcgtgtat
cgcgaatccgaccgcagcctgcttggtacggcgcaactggtggaattcggcgtgctcgcg
ccggaacgcctgatcgccaccggcacccattaa
DBGET
integrated database retrieval system
