Noviherbaspirillum sp. UKPF54: FAY22_21630
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Entry
FAY22_21630 CDS
T06116
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
nok
Noviherbaspirillum sp. UKPF54
Brite
KEGG Orthology (KO) [BR:
nok00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nok03021
]
FAY22_21630
Transcription machinery [BR:
nok03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FAY22_21630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_16
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QDZ30327
UniProt:
A0A5B8ND73
LinkDB
All DBs
Position
4671212..4671778
Genome browser
AA seq
188 aa
AA seq
DB search
MRTLAHLDDMQCATLAQRGDSRAFSELVARYQDRIYRFLLRLTRSPEDAAELTQDTFLRA
YQGLNRWRPDAQFKTWLFRIARNGAFDLLRRGKVVEFVELDDEADMPDAAAGPEAVVETA
QRYRVLEAALLRLPAEHREILLLREIEDMSYEHIADVLDLNIGTVKSRIARARAALLDIV
RHPTEPRR
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgcgaactcttgcccacctcgacgacatgcaatgcgcaacgctcgcccagcgcggcgac
agccgtgcattttccgaactggtcgcgcgctaccaggaccgcatctaccgcttcctgctg
cggctgacccgctcgccggaagacgcggcggaactgacccaggacaccttcctgcgcgct
taccaggggctcaatcgctggcgccccgatgcccagttcaagacctggctgtttcgcatc
gcgcgcaatggcgcattcgacctgctgcgtcgcggcaaggtcgtcgagttcgtggaactg
gacgacgaggccgacatgccggatgcggcggccgggccggaagcggtcgtcgaaacggca
cagcgctaccgtgtcctggaagcggcgttgttgcgccttccggccgaacatcgcgaaatc
ctgctgctacgggaaatcgaagacatgagctatgaacatatcgcggacgtgctcgacctg
aacatcggtaccgtcaagtcgcgcattgcacgggcgcgcgccgcattgctcgacatcgtc
agacatccaacggagccacgccgatga
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