Nocardioides okcheonensis: LN652_07765
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Entry
LN652_07765 CDS
T07822
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
noq
Nocardioides okcheonensis
Pathway
noq03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
noq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LN652_07765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
noq03400
]
LN652_07765
DNA repair and recombination proteins [BR:
noq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LN652_07765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
DUF6739
Motif
Other DBs
NCBI-ProteinID:
UFN46086
LinkDB
All DBs
Position
1606014..1606967
Genome browser
AA seq
317 aa
AA seq
DB search
MRAIWKGAVSFGLVSVPVKLYAATESHDVSFRQVHAKDGGRIKYQRVCSLDGEEVAYADI
AKGYETEDGEMVILTDDDMAELPSTSSREIAVEKFVPREQIDPLLFEKSYYLEPEGQGAK
PYALLRQALKDADRMAVVTVALRQRTTIAVLRVRETEAGEVIVLQTMMWPDEVRVPDFKV
EVDDAKPQEVKMAQMLVETLAGDFDATEFEDDYAGAVEALVKSKIEGGEIKRTETSTKTS
GEVVDLLAALQKSVAAAKSARGEDSGDSDDEKPAKKTAAKKSAAKKTPAKKAAAKKTAAK
KTAKKTATRKTAAKKAS
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcgatctggaagggcgcggtctccttcgggctggtcagcgtgccggtcaagctg
tacgccgccaccgagagccacgacgtgtcgttccgccaggtgcacgccaaggacggcgga
cggatcaagtaccagcgggtctgctccctcgacggcgaggaggtggcctacgccgacatc
gccaagggctacgagaccgaggacggcgagatggtcatcctcaccgacgacgacatggcc
gagctgccgtcgacgtcgtcgcgcgagatcgcggtggagaagttcgtgccgcgcgagcag
atcgacccgctgctgttcgagaagtcctactacctcgagccggagggccagggcgccaag
ccgtacgccctgctccgccaggccctcaaggacgccgaccggatggcggtcgtcaccgtc
gcgctgcgccagcgcaccacgatcgcggtgctgcgggtgcgcgagaccgaggccggcgag
gtgatcgtgctgcagacgatgatgtggcccgacgaggtccgcgtccccgacttcaaggtc
gaggtcgacgacgcgaagccgcaggaggtcaagatggcgcagatgctcgtcgagaccctc
gccggcgacttcgacgccaccgagttcgaggacgactacgccggcgccgtcgaggcgctc
gtgaagtccaagatcgagggcggcgagatcaagcgcaccgagacctccacgaagacctcc
ggcgaggtcgtcgacctgctcgccgcgctgcagaagtcggtcgccgccgcgaagtccgcg
cgcggggaggactccggcgactccgacgacgagaagcccgcgaagaagaccgctgccaag
aagtcggcggcgaagaagacccccgccaagaaggccgccgcgaagaagacggcagcgaag
aagaccgcgaagaagaccgcgaccaggaagacggccgccaagaaggccagctga
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