Natronococcus occultus: Natoc_3896
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Entry
Natoc_3896 CDS
T02426
Name
(GenBank) mismatch repair ATPase (MutS family)
KO
K07456
DNA mismatch repair protein MutS2
Organism
nou
Natronococcus occultus
Pathway
nou03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Natoc_3896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nou03400
]
Natoc_3896
DNA repair and recombination proteins [BR:
nou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Natoc_3896
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
HHH_5
HHH
AAA
AAA_21
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AGB39596
UniProt:
L0K3J7
LinkDB
All DBs
Position
complement(3838696..3840699)
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AA seq
667 aa
AA seq
DB search
MDLESIPGVGEKTARSLSALDDPERALRTGDVAAIASAPGISQGRAARIARGAIRHEHDD
PGEFLATDRAREVYRSLLALLKDRTVTDYASQRLETLYPSARRSRIEEVQAFTEDALARD
PDPDVLEALEGVEPLREPDDVRVRERCLATTDAERYAEAKEAIPELPVEVVEDAQGLAEL
ARGYATVIALDESFAGITVEGDVRVEPDALGNPAEVVPERSLAFFARNRDRIRAAIEVHR
VAALDSDYDLAALEGGLSRLAADGTVAGDEELDRLTAAADDVDAAVGTAETVANDHLREA
IREQDVTIEGSDLLSLVERGAGVDSLLSRELADEHAAAVEAAREHVSDALALEPGEAELA
RRIFTDEPTFPVKRDEDAVARLRTELTTARERRASRLKRELAADLADQREAARQLVRDAL
ELDVELAVARFADEFACTMPTVVDDDVGFAIEGGRSPLLEEPVEAIDPVDYEVAGVALLS
GVNSGGKTSTLDLVASVVVLAHMGLPVPAEDARLQRFDDLHYHAKTQGTLDAGAFESTVR
EFADLAQSGEGSLVLVDELESITEPGASAKIIAGILEALEDNGATAVFVSHLAGEIRETA
GFDVTVDGIEAVGLVDGELEVNRSPVKDRLARSTPELIVEKLADESEQESESIRERSFYA
TLLEKFD
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggacctcgagtcgatcccgggcgtcggcgagaagaccgcccggtcgctgtcggccctc
gacgatcccgagcgagcgctgcgaacgggcgacgtcgcggcgatcgcgtcggcacccggt
atctcgcagggccgggccgctcgcatcgcgcgcggcgcgatccgacacgaacacgacgat
cccggcgagttcctcgcaaccgaccgggcccgcgaggtctaccggagtctgctcgcgtta
ctcaaagaccgcaccgttaccgactacgcgtcccaacgcctcgagacgctgtacccaagc
gcccgccgttcgcgcatcgaggaggtgcaggcgttcaccgaggacgcgctcgcccgcgac
cccgaccccgacgtcctcgaggcgctcgagggcgtcgaaccgcttcgggaacccgacgac
gttcgggtccgcgagcgctgtctggcgacgaccgacgcggaacgctacgccgaggccaag
gaggcgatccccgaactcccggtcgaggtcgtcgaggacgcccagggactggccgaactg
gcccgcgggtacgcgacggtgatcgcactcgacgaatcgttcgcggggatcaccgtcgaa
ggcgacgttcgcgtcgaaccggacgcgctcgggaacccggccgaagtcgtccccgagcga
tcgctggcgtttttcgcgcgcaaccgcgaccggatccgggctgcgatcgaggttcaccgc
gtcgcggcgctcgattcggactacgacctcgcggcactcgagggcggcctctcccggctc
gcagcggacggaaccgtcgccggcgacgaggagctcgaccggctgacggcggccgcagac
gacgtcgacgccgcggtggggacggccgaaaccgtcgccaacgatcacctccgggaggcg
atccgcgaacaggacgtcacaatcgaggggtcggacctgctgtcgctggtcgaacgcggc
gcgggtgtcgactcgctgctctcccgagagctggccgacgagcacgcggccgccgtcgag
gccgcccgtgagcacgtgagcgacgcactcgccttggaacccggggaggccgagctggcc
cgtcggatcttcaccgacgagccgacgtttccggtcaagcgcgacgaggacgcggtcgct
cgcttacggaccgagctgacgacggccagagagcgacgcgcaagtcgactcaagcgggag
ctcgcggccgaccttgccgatcagcgcgaggctgcccgacagctcgtccgtgacgcgctc
gaactcgacgtcgagctcgccgtcgcccgttttgccgacgagttcgcgtgtacgatgccg
acggtcgtcgacgacgacgtcgggttcgccatcgagggcggtcgatccccgctgctcgag
gaacccgtcgaggcgatcgaccccgtcgactacgaggttgccggcgtcgccctgctgtcg
ggggtcaacagcggcgggaagacctcgacgctggatctggtggcgagcgtcgtcgtcctc
gcccacatggggctcccggtgcctgccgaggacgcacggctccagcggttcgacgatctt
cactaccacgcgaagacccagggaaccctcgatgcgggggctttcgagtcgacggtcagg
gagttcgcagacctggcacaaagcggggaagggtcgcttgtactggtcgacgaactcgag
agcatcaccgaacccggcgccagcgccaagatcatcgcgggtatcctcgaggcgctcgag
gacaacggcgcgaccgcggtcttcgtctctcacctggcgggcgagatcagagagacggcc
gggttcgacgttacggtcgacgggatcgaggccgtcgggctggtcgacggcgaactcgag
gtcaatcgctcgccggtgaaagaccggctggcccgctcgacgcccgaactgatcgtggag
aaactcgccgacgagtccgagcaagagtccgaatcgatccgagaacgctcgttctacgcg
acgttgctcgaaaagttcgattag
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