Novosphingobium pentaromativorans: JI59_18985
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Entry
JI59_18985 CDS
T03399
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
npn
Novosphingobium pentaromativorans
Pathway
npn03030
DNA replication
npn03430
Mismatch repair
npn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
npn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JI59_18985
03430 Mismatch repair
JI59_18985
03440 Homologous recombination
JI59_18985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
npn03032
]
JI59_18985
03400 DNA repair and recombination proteins [BR:
npn03400
]
JI59_18985
Enzymes [BR:
npn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JI59_18985
DNA replication proteins [BR:
npn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JI59_18985
DNA repair and recombination proteins [BR:
npn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JI59_18985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
AIT81698
UniProt:
G6E794
LinkDB
All DBs
Position
3876641..3877759
Genome browser
AA seq
372 aa
AA seq
DB search
MKATIERSTLLRCLSHVQSVVERRNTIPILSNVLIEAAAGGSLRIMATDLDIQVVENLSA
VSVDTPGSVTVSAHLLFDIARKLPEGSQVSLDAADNRMVVKAGRSRFQLPTLPRDDFPVI
AEGELPTSFEIPAATLAQMIDRTRFAISTEETRYYLNGIFLHVSDEELKAAATDGHRLAR
FTIKRPDGAEGMPDVIVPRKCVAELRKLLEEALDTNVLIDLSASKIRFTLGGENGVVLTS
KLIDGTFPDYTRVIPTGNDKLLRVDPRSFFEGVDRVATIATEKTRAVKMALEPDRVTLSV
TSPDNGTAAEEVPAEYASEGFEIGFNANYLKDILGQIEGDSVEMHLADAGAPTLIRQDEK
SPALYVLMPMRV
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccacgatcgaacgttccacgctcctgcgatgcctgtcccacgtgcagtcagtc
gttgagcggcgcaataccattcccattctctcgaacgtgctgatcgaggcagccgcgggt
ggttcactgcggatcatggcgaccgacctggacatccaggtggttgagaacctgagcgcg
gtctcggtcgacacgccgggatcggtcacggtttccgcgcaccttcttttcgacattgcc
cgcaagctgcccgaaggcagtcaggtcagtctggatgccgccgacaaccgcatggtcgtg
aaggccgggcgcagccgcttccagcttccgaccctgccgcgtgacgacttcccggtcatc
gccgagggcgaattgccgacgagcttcgagatccctgccgccaccctggcgcagatgatc
gaccggacccgtttcgcgatctcgaccgaggaaacgcgctactacctcaacggcatcttc
ctgcatgtctcggacgaggaattgaaggccgcggccaccgacggtcaccgtctcgcccgc
ttcacgatcaagcgtcccgacggcgcagagggcatgcccgacgtgatcgttccgcgcaaa
tgcgttgccgaactgcgcaagctgctggaagaggcgctggacaccaacgtcctgatcgac
ctgtcggcctcgaagatccgcttcaccctgggcggtgagaacggcgtcgtcctgaccagc
aagctgatcgacggaaccttcccggactatacgcgggtcatcccgaccgggaacgacaag
ctgctccgggtcgatccgcgcagcttcttcgagggcgtggaccgcgtggcgaccatcgcc
accgaaaagacccgtgcagtgaagatggcgcttgagccggaccgcgtcacgctttcggtg
acctcgcccgacaacggcaccgcggctgaggaagtccccgccgaatacgcatcggaaggc
ttcgagatcggcttcaatgccaattacctcaaggacatcctcggccagatcgagggtgac
agcgtggaaatgcacctcgctgacgccggtgcgccgacgctcatccgtcaggacgaaaag
agcccggcgctctacgtcctgatgccgatgcgtgtctga
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