Novosphingobium sp. PP1Y: PP1Y_AT257
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Entry
PP1Y_AT257 CDS
T01515
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
npp
Novosphingobium sp. PP1Y
Pathway
npp00860
Porphyrin metabolism
npp01100
Metabolic pathways
npp01110
Biosynthesis of secondary metabolites
npp01120
Microbial metabolism in diverse environments
npp01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PP1Y_AT257
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
npp04147
]
PP1Y_AT257
Enzymes [BR:
npp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
PP1Y_AT257
Exosome [BR:
npp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
PP1Y_AT257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
Motif
Other DBs
NCBI-ProteinID:
CCA91003
UniProt:
F6IFC8
LinkDB
All DBs
Position
24716..25711
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AA seq
331 aa
AA seq
DB search
MTGSYPHTRLRRTRATAWSRAMHRENVLTPADLIWPLFVTEGQGVEEPIASLPGVSRWSV
DGIVERAREAADLGIPCLALFPNTQRERRSDDGKEALNPDNLMCRALRAVRDALGDRVGL
LTDVALDPYTSHGQDGLVDANGYVLNDETVEVLVGQSLNQASAGADIIAPSDMMDGRIGA
IRDALEDEGHANVQIMSYAAKYASAFYGPFRDAVGSRGLLKGDKKTYQMDPANGEEALRE
VELDLAEGADSVMVKPGLPYLDIVRRVKEAFEVPVFAYQVSGEYAMIEASVAAGAGDRDA
LVLETLMAFKRAGCSGVLTYHAAHAARLLHG
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgactggatcctatccccacacccgacttcgccgcacccgcgccacggcctggagccgt
gcgatgcatcgcgagaacgtactcactccggccgacctgatctggccgctcttcgtgacc
gaagggcagggcgtggaagaaccgatcgcctcgctgcccggcgtgtcgcgctggtcggtg
gacggcattgtcgagcgggccagggaagcggcggacctgggcattccctgccttgccctg
ttccccaatacccagcgcgagcgtcgcagcgacgacggcaaggaagcgctcaatcccgac
aacctcatgtgccgtgccctgcgcgccgtgcgcgatgcactcggcgatcgcgtcggactg
cttaccgatgtggcgctcgatccctataccagccacggccaggacgggctcgtcgatgca
aacggctatgttctcaatgacgagaccgtcgaggtcctggtcggccagtcgctcaaccag
gcgtcggccggggcggacatcattgcgccgtcggacatgatggacggacgcatcggcgcg
atccgcgatgcgctggaggacgaagggcacgccaacgtgcagatcatgtcctacgcagcg
aaatatgcttcggccttctatggtccgttccgcgatgccgtgggttcgcgcggcctgctc
aagggcgacaagaagacctaccagatggacccggccaacggcgaggaagcgctgcgcgag
gtcgaactggacctggccgaaggcgccgacagcgtgatggtaaagccggggctgccttat
ctcgatatcgtgcgccgggtgaaggaggcattcgaagtccccgtctttgcctaccaggtc
tcgggcgagtacgcgatgatcgaggccagcgtggcagccggggcgggcgaccgcgacgcg
ctggtgctggagacgctcatggcattcaagcgtgccggctgctcgggcgtgctgacctat
cacgccgcccatgcggcgcgattgctccatggctga
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