Novosphingobium sp. PP1Y: PP1Y_Mpl4467
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Entry
PP1Y_Mpl4467 CDS
T01515
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
KO
K24073
RNA polymerase sigma factor CnrH
Organism
npp
Novosphingobium sp. PP1Y
Brite
KEGG Orthology (KO) [BR:
npp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
npp03021
]
PP1Y_Mpl4467
Transcription machinery [BR:
npp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PP1Y_Mpl4467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
DUF134
Sigma70_ECF
HTH_23
Xre-like-HTH
HTH_28
HTH_17
GerE
HTH_10
HTH_3
HTH_24
HTH_29
Motif
Other DBs
NCBI-ProteinID:
CCA90380
UniProt:
F6IDK5
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All DBs
Position
Mpl:complement(451532..452089)
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AA seq
185 aa
AA seq
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MAVGDGDDASAAVAALAGRQSGFDTLMKRHREAVFRFVRGLTGNESDALDITQECFVAAF
LALGRYDRTRPFRAWILRIARNKCHDWARRRTVRRFFSFAVPLDDASDIADPEENPEEAL
SSRRGVERIHEAIASLPASLKEPLLLCSLEDMTQDEAAEVLGISRKAVETRIYRARQKLS
HLLEG
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcggggatggcgatgatgcatcggcggcggtcgccgcgcttgccggtcgccag
tcgggcttcgataccctcatgaagcggcaccgcgaggcggttttccgcttcgtgcgcggc
cttaccggtaatgaaagcgatgcgctcgacattacgcaggaatgctttgtcgctgcgttc
cttgcccttggccgctatgaccgcacgcgcccgtttcgtgcatggatcctgcgcatcgcg
cgcaacaagtgccatgactgggcccgtcggcgaacggttcgccgcttcttttcctttgcc
gtgccgctcgacgatgcgtccgatattgccgaccccgaggagaacccggaagaggctctt
tcatcgcgtcggggggtggagagaatccacgaggcgattgccagcttgccggccagcctc
aaggaaccgctgctgctctgttctctggaagacatgacgcaggatgaggctgccgaagtt
ctaggcatcagccgcaaggcggtggaaacccgcatttatcgagcccgccagaaattgtcg
cacctgcttgaggggtaa
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