Nanorana parkeri (Xizang Plateau frog): 108794518
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Entry
108794518 CDS
T04897
Symbol
DHX15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108794518 (DHX15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
npr03041
]
108794518 (DHX15)
03009 Ribosome biogenesis [BR:
npr03009
]
108794518 (DHX15)
Enzymes [BR:
npr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108794518 (DHX15)
Spliceosome [BR:
npr03041
]
Complex A
U2 snRNP components
U2 related factors
108794518 (DHX15)
Complex B
108794518 (DHX15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
108794518 (DHX15)
Ribosome biogenesis [BR:
npr03009
]
Eukaryotic type
90S particles
Helicases
108794518 (DHX15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Atrophin-1
Flavi_DEAD
AAA_29
AAA_30
Motif
Other DBs
NCBI-GeneID:
108794518
NCBI-ProteinID:
XP_018421072
LinkDB
All DBs
Position
Unknown
AA seq
758 aa
AA seq
DB search
MSKRHRLDLGDDYATNKKREGKDRDRDRDDRSKDRDRDRDRDRERDRDKDKDSRSASNPP
FIPAGLPTVKPAAVPQGINPFTNLPHTPRYYEILKKRLQLPVWEYKERFTDILTRNQSFV
LVGETGSGKTTQIPQWCVDYMRSLVGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEV
GYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVVILDEAHERTLATDILMGVLK
EVVRQRNDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEPERDYLEAAIR
TVIQIHMCEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQQ
QRIFEPPPPKKTNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLL
VTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKL
GIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIA
SCEYNCSNEILSITAMLSVPQCFIRPTEVKKAADEAKMRFAHIDGDHLTLLNVYHAFKQN
HESSQWCYDNFINYRSLMSADNVRQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGY
FMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEW
LVKIAVQYYDMGNFPQCEAKRQLERIIAKLQTKEYSQY
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagcggcaccggctggacctgggcgacgactatgccacgaacaagaagagggaa
gggaaggacagagatcgagatagagatgaccgatcaaaggatcgagaccgggacagagat
agagatcgtgaaagagatagggacaaggataaggattcgcgtagtgcatcaaatccccct
ttcatacccgctggacttccaacagtaaagccggcagcagtacctcaaggcatcaatcca
ttcaccaacctgccccacacgccacgctattatgagatcttaaaaaagcgtcttcagttg
ccggtctgggagtacaaggaacggtttacggatatccttaccaggaaccagtcctttgtt
ttggttggagagactggttctggaaaaaccacacagattcctcagtggtgtgttgattac
atgagatctttggtcggacccaagagaggtgttgcatgtacccagcccagaagggttgct
gcaatgagtgtggcacagagagttgccgacgaaatggatgtcatgctgggccaggaagtt
ggttattctattcgatttgaagactgcagcagcgcaaaaactatcctgaagtacatgacc
gatggtatgctgcttcgggaggctatgaatgacccgttgttggaaagatatggtgtagtt
attctggacgaagcccatgagagaacgttggcaacggatattttaatgggggtgttaaaa
gaagttgtgcgacaaaggaatgatttaaaggttatagtcatgagtgccacacttgatgca
ggcaaattccaagtgtattttgatagctgtcctctcctgacaattcccggccgcacacat
cctgtggaaatcttctacactccggagccagagagagactacctagaagctgctatccgt
acagtgatccagattcacatgtgtgaagaggaggaaggagacctactgctgttcctcaca
ggccaggaggagattgatgaagcttgtaaaaggattaagcgtgagattgatgacttgggc
cctgaagttggtgacataaagatcatcccattatattctaccctcccaccccaacagcag
cagagaatttttgagccccctccacccaagaaaacaaacggtgcaataggaaggaaagtt
gtcgtttccaccaatattgctgagacctcgttgaccattgatggtgtcgtatttgtgatt
gatcctgggtttgcgaagcaaaaggtgtacaaccctcgtattagagtagagtcccttctg
gtgacggctatcagcaaggcttcagcacagcaaagggcaggccgtgcgggtcgtaccagg
ccggggaagtgctttagactttacacagagaaagcttacaaaactgaaatgcaggacaac
acataccctgaaattttgaggtctaatctgggttcagtggtgttgcagcttaaaaagctt
ggcattgatgacttggtccactttgactttatggatcctccagcccctgaaactttaatg
cgagctctggagctgctgaattacctggctgccttaaacgatgacggtgacctgactgaa
cttggatctatgatggcagagtttcctctggaccctcagctcgccaagatggttattgcc
agttgtgaatacaactgttctaatgagatcctatccataactgctatgttgtcagtccca
cagtgttttattcgacccacggaagtcaagaaagctgcagatgaagccaagatgaggttt
gcccacatagatggcgatcatctaacactgctgaatgtgtaccacgccttcaaacaaaat
catgagtcgtctcagtggtgttatgacaacttcattaactacaggtccctgatgtctgca
gacaatgtacggcagcagctgtcacgaatcatggacagatttaacttgccgcggcgaagc
acagacttcacaagccgggattattacattaatattagaaaagctttggttaccggctat
tttatgcaggtggcacatttggaacggactggccattatctgaccgtgaaagacaaccaa
gtcgtgcagttacatccttcaacagttctggaccacaagcctgagtgggtcctgtataac
gaatttgtacttacaacaaagaactacatccgcacatgcacagacataaagcctgaatgg
ttggtgaaaattgctgtccaatactatgacatgggcaatttccctcagtgtgaagcaaag
aggcagctggaacggattattgccaaacttcaaaccaaggagtactcccagtactga
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integrated database retrieval system
