Nanorana parkeri (Xizang Plateau frog): 108799304
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Entry
108799304 CDS
T04897
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM11-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
108799304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npr04121
]
108799304
Enzymes [BR:
npr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108799304
Ubiquitin system [BR:
npr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108799304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_4
BshC
zf-RING_10
Prok-RING_4
zf-UBR
zf-ANAPC11
Fib_alpha
Exonuc_VII_L
DUF2959
Laminin_II
Motif
Other DBs
NCBI-GeneID:
108799304
NCBI-ProteinID:
XP_018426656
LinkDB
All DBs
Position
Unknown
AA seq
595 aa
AA seq
DB search
MASADLRQELDCSVCLSIYTDPVMLRCGHNFCRVCIDRVLDKQKGSGGYSCPECREEFQD
RPALHRNILLRNIAETFRSTQPDKEDSGVLCTQCIHTSVPAVKSCLLCEASLCDKHLRVH
SKAPEHVLCDPTTSLENRKCSVHKKILEYYCTEDSACICVSCRLDGEHQGHKVEILDKAS
EKKKKKLRSDLQKLNTEREKTEKRVRSLEERRRKVQGNAAGVTERVSDLFRDLRRRLEDL
EKRVLREISRQEEQLSHQLSGLIQKLEIKKAELSRKMDHIEEMCNLTDPLTVLQESDTGD
LCDTEEGDEEDRERHDRLLHDGGGLDVAGISHTLHSGLSDMMKGVNVCLNIQEASDIVLD
VNTAQNNLQISEDRKSLSRSDIKQNRPETTERFQSYCQVLSSRRFSSWRHYWEVDVSRSD
QWIVGMCYPSIERGGGQSLIGHNYKSWGLYSDTNQCSVYHNSKEIKLPDKISSNRVRVSL
DYEAGRISFYDLCDPIRHLHTFTTTFTEPLHAVLWVGKGCIKISGQGQDIAGIYEVNVSS
WFLDKHSNISDSQSLTTDIPGVYIVGVPDNNEEIRTDHGTRLCYNEIDGTFMSQT
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgctgatctgagacaggagctggactgttccgtctgtctgagcatttataca
gatcctgtaatgctgagatgtggacacaacttctgccgggtctgtattgatcgtgtgttg
gataaacagaaggggtctggaggttattcatgtcctgagtgcagagaagagttccaggat
cggcctgcactgcacaggaacatattactgcgtaacatagcagagacattccggtctact
cagccagataaggaggactccggagtcctctgtactcagtgtattcacacctctgtacct
gctgtgaagtcctgtcttctatgtgaagcttctctgtgtgacaaacacctgagagtccac
agcaaggcaccagaacacgtcttatgtgaccccaccacttccctggagaacaggaaatgc
tccgtccataagaagatcctggagtattactgcactgaggactcggcctgtatctgtgtg
tcctgcaggctggatggggaacaccagggacacaaggtggagattctggacaaggcctct
gagaagaagaaaaagaaactgagatctgatcttcagaaactgaacacagagagagagaag
acggagaaaagagtccggagtctggaggaacgcaggaggaaagtacaaggaaacgcagct
ggtgtaacagagagagtctctgacctgttcagagacctccggagacgtctggaagacctg
gagaagagagtcctgagggagatctccaggcaggaggagcagctctcacatcaattgtct
ggcctgatccagaagctggaaataaagaaggccgagctgtccaggaagatggatcacatt
gaggagatgtgtaacctgactgatccactgactgtcctacaggaatcagacacaggggac
ttgtgtgatactgaggagggggatgaggaggacagagagagacatgatagacttctccat
gatggagggggtctggatgtggctggaatctcacacacattacactcggggttatctgat
atgatgaaaggggtaaatgtatgcctcaatatacaggaagcttcagatatagtgctggat
gtaaacacagctcagaataatctacagatatcagaggacaggaaatctctatccaggtca
gatataaagcagaatcgtccagaaacaacagagagatttcagagttattgtcaggtatta
agcagcaggagattctcctcatggagacattactgggaagtggatgtcagtagatcggat
cagtggatagtcggtatgtgttatcccagtatagagaggggaggaggccagtcattgatt
ggacacaattacaagtcctggggtttatacagcgatacaaatcagtgttcagtgtaccat
aacagcaaagagattaagttacctgacaaaatctccagtaacagagtcagggtctctctg
gattatgaggccgggcggatctccttttatgatctgtgtgacccgatccgacacttacac
acgttcaccaccaccttcactgagcccctccatgctgtgttatgggtggggaaaggttgt
ataaagatatctgggcagggtcaggacattgcaggaatatatgaggtgaatgtgagttcc
tggtttctggacaaacactctaacatcagcgattctcagagcctcaccacagacattccc
ggggtgtacattgtgggggtcccagacaacaacgaggagataaggactgaccatgggacc
agactgtgttacaatgagattgatggaactttcatgtctcaaacttaa
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