Nanorana parkeri (Xizang Plateau frog): 108799522
Help
Entry
108799522 CDS
T04897
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Pathway
npr04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
108799522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
npr04121
]
108799522
Enzymes [BR:
npr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108799522
Ubiquitin system [BR:
npr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
108799522
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SPRY
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
PRY
zf-C3HC4_2
zf-RING_2
zf-C3HC4_3
zf-RING_5
ATG17_like
AIP3
Apolipoprotein
DUF6507
TssR_C
zf-ANAPC11
zf-rbx1
Perilipin
CdaS_N
zf-UBR
DUF5617
CTD11
Syntaxin_2
Exonuc_VII_L
DUF2959
PIN_8
Herpes_UL14
ApoLp-III
GAS
IFT57
Laminin_II
DUF5798
Baculo_PEP_C
Motif
Other DBs
NCBI-GeneID:
108799522
NCBI-ProteinID:
XP_018426887
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MTATDLREELSCSICLERYMDPVSLQCGHNFCQHCIKSALDAQEQSGIYTCPECRAEYPD
RPQPEKNRKLCNIVECYLMAHLEEDPEETKILCTYCDFVEPAVKMCLQCETYFCSRHLNH
HNNSVNHFLLDPTTSLENIQCPTHNKMLKYYCFQDESCVCVSCFATGDHRGHVVQPIYEV
SEVKTKEIRHVLETLTSGKSEMEKGLQTTRYHLEKVQKNADSITQRVNGFFEDIQEQLNS
LKKRILGELNRQTEEARSQVSDLIKQMEVKSDKMTRRINHIQDICNNQDPFYILQGHKLA
RDVFETVSGADKTSHLIDLNEGLVSNILHTGLVDILTSVKKYVYVGNVSTLLMDASTAHN
KMELSADLKTVADSDTNHGRPGSPLRFVVYNQVLSVNAYTEGQHYWEVETSKTGIWDIGL
AYPSIERDGKPSGIGDNDKSWCLRKYTKKYMAAHNSKAQSLLHEQCSQVIGMYLDYEAGR
LSFYELLHPSRCLYRHIYTFTATFTEPMHAAVYVDDGGWVTFKHK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaactgatctgagggaggagctaagctgttccatatgtctggaaaggtacatg
gacccagtatccctgcaatgtggtcataacttctgccagcattgtatcaagtctgcactg
gatgcccaggaacagtctggtatctacacctgtccagagtgcagggcagagtatccagac
cgccctcagccggagaagaacagaaagctctgtaacatagtagaatgttacctaatggcc
catctggaggaagacccagaggagaccaagatcttgtgcacctactgtgattttgtagaa
ccggctgttaagatgtgccttcagtgtgagacatatttttgcagtaggcacttaaaccac
cataacaactcggttaaccacttcttactcgaccctacaacttctcttgaaaacatacag
tgtcccacccacaataagatgctgaagtattattgttttcaggacgaatcttgtgtctgt
gtgtcatgctttgctacaggggatcatcggggacacgtggtacagccaatctatgaagtc
tctgaggtgaaaacaaaggaaatcaggcatgttttggaaactctaacgtcggggaaatca
gaaatggaaaagggtctccaaacgacgaggtaccacctggaaaaagtgcagaagaatgca
gactccatcacccagagggtcaatggattctttgaggacatccaagaacaactgaacagt
ctgaagaagagaattttgggtgagctcaacaggcagaccgaagaggcaagatcgcaagtg
tctgatctcatcaaacagatggaagtgaaatcagataagatgactcggagaattaaccat
attcaggacatctgcaacaaccaagatcccttttacatcctacagggacacaaattggca
agggatgtttttgaaactgtgtcaggagcggacaaaacaagccacctcattgacctaaat
gaaggtttggtctcgaatatcttacacactggtctggtcgatattctgacctccgtaaag
aaatatgtctatgtaggtaatgtgtcaacactcctaatggacgccagcacagctcacaac
aagatggagctatccgcggacttaaaaactgtggctgactctgataccaaccatggccgg
ccagggtcaccgctgagatttgtggtctacaaccaggtgttgagtgtaaatgcctataca
gagggacagcactactgggaagtagagactagcaaaaccggtatatgggacattggcttg
gcctatcccagcatcgagcgagatgggaagccgtccggtattggcgataatgataagtca
tggtgcctgcggaaatacaccaaaaagtacatggccgcccacaactcgaaagcccagtca
ttgcttcatgaacagtgctcccaagtgatcggaatgtatctggattacgaggctggtagg
ctgtctttttatgagctcctccacccatccagatgcttgtacagacacatatacaccttt
actgccacgttcaccgaaccgatgcatgccgcggtgtatgtagacgatggaggctgggtc
acattcaagcacaaataa
DBGET
integrated database retrieval system
