Nanorana parkeri (Xizang Plateau frog): 108799634
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Entry
108799634 CDS
T04897
Symbol
DHX40
Name
(RefSeq) probable ATP-dependent RNA helicase DHX40 isoform X1
KO
K18711
ATP-dependent RNA helicase DHX40 [EC:
5.6.2.6
]
Organism
npr
Nanorana parkeri (Xizang Plateau frog)
Brite
KEGG Orthology (KO) [BR:
npr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
npr03019
]
108799634 (DHX40)
Enzymes [BR:
npr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108799634 (DHX40)
Messenger RNA biogenesis [BR:
npr03019
]
Eukaryotic type
mRNA processing factors
Other processing factors
108799634 (DHX40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
AAA_22
HA2_C
HA2_N
T2SSE
AAA_19
nSTAND3
AAA_29
Motif
Other DBs
NCBI-GeneID:
108799634
NCBI-ProteinID:
XP_018427027
LinkDB
All DBs
Position
Unknown
AA seq
747 aa
AA seq
DB search
MESKRRPGKSCTREKAYLPRLPIEKCKDKLVQVARDTSFFIVTGETGSGKTTQLPQYLYK
AGFAEHGIIGITQPRRVATISVAQRVSEEMNCSLGSTVGYQVRFDDCTSQKTDIMYLTDG
CLLRHTLTDPDLLKFSTIVLDEAHERSLSTDILFGLLRKQFISKHSPKRKYRLKVIVMSA
TLDIERLSEFFNNCPVVTIPGKVFPIKEKFLNLIGPRDKDNTAYITETVKVTLQTHLNET
AGDILVFLTGQSEIEKACDILFQKAELIDYRHDVYDSSVEGLLILPLYGSMPTDQQKRIF
LPPPKGIRKCVVATNIAATSVTIEGIRHVIDSGFVKQLNHNPRAGLDVLEIVPISKSEAV
QRAGRAGRTESGKCYRIYSEEFWNKCMPDHMIPEIKRTSLTSVILTLKCLGLNDVIRFPY
LDPPEERFILEALRKLYQCSAIDRSGNVTRLGHFLIEFPLSPNLACAVIKATSMGCEDLL
LPVAAMLSVEHVFIQSGVSEKQKELENSHERLSTMAGGGNDFAILLYIFEQCKSIDSPAS
WCHKNAIHWRAVKTAFSVEKQLRDITNKLKEMKDFPIESIDVPRNDIFIRCLCAGLFSNV
ARRSVGRTFCTMDGNGSVVHIHPSSALFGQETNLQWILFYSVLVTSKIFVRTVCPIRYEW
VKDLLPKLHDVDAYELSNVAREEVTEEELAKWNSREKTKQPNDGLESSLKKMQKRNDDQS
ISDARARFLQRKQQKCQNPEIDQANRS
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggaatctaaaaggaggcctggtaaaagctgcactcgagaaaaagcctacctacccaga
cttcctattgaaaaatgcaaagataagcttgtccaggtggccagggatacttcattcttt
attgtgactggagaaactggcagtgggaaaactacacagcttcctcagtatctctacaaa
gcagggtttgcagagcatggcattattggtatcacgcagccacgcagagttgccaccata
tctgttgcacagagagtttcagaagaaatgaactgctcattgggaagtactgttggttac
caagtacgatttgatgactgtacttcgcagaagactgatattatgtacctgactgatggg
tgtttattacggcacactctgacagaccccgatctcctgaaattcagcacaattgtcttg
gatgaagctcatgaacgaagcttaagtactgatattttgtttggtctgctgagaaaacag
ttcatatcaaagcattctccaaaaaggaagtaccgcctcaaagttattgtgatgtctgcc
acactggatattgaacgactttctgagttctttaataactgtccagtagtcacaattcca
ggaaaagtctttccaattaaagagaaattccttaaccttatcggcccaagagacaaagac
aacactgcgtacattacagagactgtgaaagtcacactacagacgcatttaaatgagact
gctggagacatccttgtttttcttacaggtcagtcagagattgagaaggcctgtgacata
ctattccaaaaggctgagctaattgattatcgccatgatgtttatgactcttcagtggaa
ggtctgctaattttgccattgtatggctccatgccaacagatcagcaaaaaagaatattt
cttcctccccctaaagggatcagaaaatgtgttgtagccacaaatattgcagcgacatct
gtgaccattgaaggaataaggcatgtaatagacagtggatttgtaaagcagttaaaccat
aacccaagggctggactggatgttttagaaatagtccctatttcaaaaagtgaagcagtg
cagagagcagggagggcgggcaggacggaatccggaaaatgctaccgaatttacagtgag
gaattctggaataaatgtatgccagaccacatgatacctgagattaaaagaacaagtcta
acatctgtcattcttacccttaaatgcctgggactaaatgatgttatcaggttcccatac
ttggacccccctgaggagaggtttattctagaagcactcaggaagctatatcagtgcagc
gcaatcgacaggagcggtaatgtcacaagattaggacacttccttatagaatttccatta
tcaccaaatctggcttgtgctgtgattaaagcaacctctatggggtgtgaagacctactc
cttccagtggcagccatgttatcagtggaacacgtcttcatacagtcaggtgtgtctgag
aaacaaaaggaactcgaaaatagtcatgaaaggttatctaccatggctggaggaggaaat
gactttgccattttgctatacatttttgaacagtgcaaatctattgatagtcctgcttca
tggtgtcacaaaaatgcaattcactggagagctgtaaaaactgcattcagtgtggaaaag
cagttaagagacattaccaataagcttaaagagatgaaggactttccaattgaaagtatt
gatgttcccaggaatgacattttcatacgttgtctttgtgctggtttgttctctaacgtt
gccagaaggtcagtaggcagaacattttgcacaatggatggaaatggcagtgtggtgcac
atccacccttcatcagctttgtttggccaggaaaccaacttgcagtggattctgttctat
agtgttttggtaacatctaagatatttgtcaggactgtgtgtcccattcgctatgaatgg
gttaaagacttgctgccaaaattgcatgatgtcgatgcttatgaattgagcaatgtggcc
agagaagaagtgactgaagaggaattggctaaatggaattctagagaaaaaacaaagcaa
cctaatgatggattggaatcctcattaaaaaagatgcaaaaaaggaatgatgatcagtcc
atatctgatgcaagagcacgcttccttcaacgtaaacagcagaagtgtcagaatccagag
attgatcaggcgaacagaagctga
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