KEGG   Nostoc punctiforme: Npun_F3478
Entry
Npun_F3478        CDS       T00713                                 
Name
(GenBank) DEAD/DEAH box helicase domain protein
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
npu  Nostoc punctiforme
Brite
KEGG Orthology (KO) [BR:npu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:npu03400]
    Npun_F3478
Enzymes [BR:npu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Npun_F3478
    5.6.2.6  RNA 3'-5' helicase
     Npun_F3478
DNA repair and recombination proteins [BR:npu03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Npun_F3478
SSDB
Motif
Pfam: DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: ACC81886
CyanoBase: Npun_F3478
UniProt: B2J135
LinkDB
Position
4371128..4373302
AA seq 724 aa
MSDAFSRLSPFIQEYIYHHQWTELRPVQIAACKVIFDTDAHLLVTAATAAGKTEAAFLPI
LTLLHTNPATTIGALYISPIKALINDQFERLNYLLKEADIPVWHWHGDVSQSRKNKLLNN
PQGILQITPESLESLLINKNNDLLRLFGDLRFVIIDEIHAFMGSERGCQIICQLQRLAKL
TQKQPRRIGLSATLGDYSLAENWLSSGTDKSVITPQTDGIKRQIKLAVEHFYISDEVDES
EATAYEKYIFNLSKSRKCLIFANNRTRTESVIASLRQIATEQGLPDIYHVHHGSISASLR
QAAENAMREPNNPAVTAATLTLELGIDIGHLERVIQLESPLSVASFLQRLGRSGRRGEAA
DMRFICAEEKPLSEASLPEQIPWQLLQSIAIIQLYLEEQWIEPIRPIKYPLSLLYHQTMS
ILTATGELSPNALAKQIFSLPPFAAISKEDFQLLLRYLIDIGHIQHTEKGKLILGLIGEK
IVRKFQFYAVFAEQQEYIVKQGATQIGSIVTPPAVGNQFALAGRTWQVVEVDFKKKAIFV
KQAEGKASIYWRGSGGTIHTKVLQRMQQVLFENVEYSYLQKNALQRLREVRHLAQQVGLD
KQNILELEKGKCCIFPWMGTVAYRTLERLLNSYCRESLEITSIGGVNPYYLTVKLAKDKF
KHLYPEIASLCEQRITSEDLLSTSEAPEIQKYDRFIPHPLLRKAFASDSLDMRELKQQVS
LWRE
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgagtgatgcttttagccgactttcacccttcatccaagaatatatttatcatcatcag
tggactgaattacgaccagtccaaattgccgcttgtaaagttatatttgacaccgatgct
catttactagttactgctgcaactgctgccggtaaaacagaagcagcttttctaccaatt
ttgactttattacataccaaccctgctactaccatcggcgcattatatattagtccaatc
aaagctttaattaatgatcaatttgagcgcctcaactacttactcaaagaagcagatatt
ccagtttggcactggcatggtgacgtttctcaaagtcgaaaaaacaaacttttaaataat
cctcaaggaattctacaaattacaccagaatctctagaaagtttgttaatcaacaaaaat
aacgacctccttcgcttatttggtgatttaaggtttgtcatcattgatgagattcacgcc
tttatgggttcagaacgcggctgtcaaattatttgccaattacaacgtttagcaaagttg
acgcaaaagcaaccgcgccgtattggtttgtcagcaactcttggtgattactcactagct
gaaaattggttgagttcaggaacagataagtcagtgattacacctcaaactgacggcata
aaacgccaaatcaaactagctgtagaacatttttatattagtgatgaagtagatgaatca
gaagcaacagcttatgaaaaatatatttttaacctcagcaaatctcgcaaatgtctgata
tttgctaataatcgcacgcgtactgaatctgtaattgcatctttgcgacaaattgccaca
gaacaaggactaccagatatatatcatgtgcatcatgggagtatatctgctagcttgcgg
caagctgctgaaaatgcgatgcgtgaacccaacaatccagcagttacggccgccactctg
actttagaattaggcatagatatcggtcatttagagcgagttattcagttagaatcaccc
ttatctgtagctagctttttacagcgcttaggacgtagtggcagaagaggtgaagctgct
gatatgcgctttatctgtgctgaagagaaaccattatcagaagcttctctaccagagcaa
ataccctggcagttgttacagtctatcgctatcattcaactgtacttagaggagcaatgg
attgaaccaattagaccgattaaatatcctttgagtttgctttatcatcagacaatgagt
attttaacagcaacaggagaactttcacctaatgctttagctaaacaaatttttagtcta
ccgccctttgctgctatttccaaagaagatttccaattattgcttcgttatttgattgat
attggtcatattcagcatactgagaaaggtaaattaatcctgggtttaataggagaaaag
attgtaagaaaatttcagttttatgctgtctttgctgaacaacaagaatatattgttaag
caaggtgcaacgcaaattggcagtattgtcacgccgcctgctgttggcaatcaatttgct
ttagctgggagaacttggcaagtagtagaagttgactttaaaaagaaagcaatttttgtt
aaacaagccgaggggaaagctagtatttattggcgtgggagtggtggcactattcatacc
aaagttttacaacgaatgcaacaagttttatttgagaatgtcgagtacagctacttgcaa
aaaaatgctttgcaacgtttacgtgaggttcgccatttggcgcagcaggttggattagat
aaacaaaatatcttagaattggaaaaaggtaaatgctgcatttttccctggatgggtaca
gttgcttatcgcaccttagaaagattactaaactcctactgtcgagaatcattggaaatt
acaagtattggtggagtaaatccttattatttaacagttaaattagccaaggataaattt
aaacatctttatcctgaaattgcttcattgtgtgagcaaagaattacttcagaagatttg
ctcagtacttcagaagcaccggaaattcaaaaatacgatcgatttattcctcatccactt
ttacgaaaagcttttgctagcgattctttagatatgagagaactcaaacagcaagtgtcg
ttgtggagagaataa

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