Nostoc punctiforme: Npun_R3936
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Entry
Npun_R3936 CDS
T00713
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
npu
Nostoc punctiforme
Pathway
npu03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
npu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Npun_R3936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
npu03400
]
Npun_R3936
Enzymes [BR:
npu01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Npun_R3936
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Npun_R3936
DNA repair and recombination proteins [BR:
npu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Npun_R3936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zinc-ribbons_6
Auto_anti-p27
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
ACC82317
CyanoBase:
Npun_R3936
UniProt:
B2J5G0
LinkDB
All DBs
Position
complement(4951144..4952019)
Genome browser
AA seq
291 aa
AA seq
DB search
MPELPEVETVRKGLNQLTLNQEITGGDVLLNRTIAYPFSVGEFVDGIEKNAIATWHRRGK
YLLAELSSPCSTSWLGVHLRMTGQLLWLHRDEPLHKHTRVRLFFGDQQELRFVDQRTFGK
IWWVPPGVAVESIITGLAKLAADPFSPEFSVEYLASKLKNRRRPIKTALLDQSVVAGLGN
IYADEALFKSGILPETLCIDLQLKQIELLRTAIIQVLETSIEAGGTTFSNFLNVKGTNGN
YGGVAWVYNRAGEPCRVCGMPIQRIRLAGRSSHFCSECQTLRGVENRERRD
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgcctgaagttgaaacagtccgaaagggtctaaatcaattgacccttaac
caagaaattacgggtggagatgtgttgctcaatcgcaccatcgcctacccgttttctgtt
ggtgagtttgttgatggaattgaaaagaatgcgatcgctacttggcatcgtcgcggtaaa
tatctcctggccgaactctcttccccttgctcaaccagttggctaggggttcatctgcga
atgaccggtcaattactatggctgcatcgagatgaaccattacataagcacacgcgggtt
agattattctttggggatcagcaggaattacgttttgtcgatcagcgcaccttcggtaaa
atttggtgggttccgcctggtgttgctgtagaaagtattatcactggtttggcaaaactg
gcagcagatccattttcgccggaattcagtgttgaatatctagcaagcaaactcaaaaac
cgtcgccgtccgattaagactgcgttactggatcaatcggtggtggctggattaggtaac
atttatgccgatgaagccctgtttaagagtggaattttacctgaaactttgtgtatagat
ttgcagctaaaacaaattgagcttttgcgaacagccataattcaagttttagaaaccagc
attgaagctggtggtacgacatttagtaatttcctaaatgttaaaggtactaacggcaac
tatggtggtgttgcgtgggtttataatcgcgctggagaaccctgtcgagtttgtggtatg
ccaattcaacggattaggctggctgggcgatctagtcatttttgctctgagtgtcaaacg
ctacggggagtggagaatcgggagagacgcgattaa
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integrated database retrieval system
