Nocardioides rotundus: K8W59_17855
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Entry
K8W59_17855 CDS
T07669
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
nro
Nocardioides rotundus
Pathway
nro03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
K8W59_17855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nro03400
]
K8W59_17855
Enzymes [BR:
nro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
K8W59_17855
DNA repair and recombination proteins [BR:
nro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
K8W59_17855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_22
PDDEXK_1
ResIII
Motif
Other DBs
NCBI-ProteinID:
UAL29586
LinkDB
All DBs
Position
complement(3606661..3610017)
Genome browser
AA seq
1118 aa
AA seq
DB search
MSDEVFRISDPLPSGTTLLEASAGTGKTWTIAALVTRYVAEGVATLDELLVVTFTRAASQ
ELRERVRAQLVEAQRALAEPPPEPERTELIRHLLDDTEDGVRLKHRRLTDALTAFDAATI
ATIHQFCQLVLRSLGVAGDTDRQARLVEDLEQLTDEVVDDLYLARWSGERTPPWTRAQAG
ELARAVVDDPRARVAPQAALEDAPESQVAMRVRFAAEVIEEIDRRKRRLGILSYDDLLGQ
LADALKDPDAPARARMRQRWKVVLIDEFQDTDPVQWQVFERAFHGAATLILIGDPKQAIY
AFRGGDVVTYLAAAQAATRRQTLGVNWRSDAALLDSLQVLLQEARLGDEQIVVRPVQADR
PGSRLEGAGAPFRLRVVRNADIGAGPRARPRVDRWREHVVADLARDVKRLLTSGATLDGR
PVRAGDVAVLAHRRDMLTAVQAALAGVGVPAVVNAGGSVFHTPAAREWVTLLESLEQPHR
SDRVRAAALTSFVGLDATELDSGGDELDDRLADRARAWQGVLANRGVAAVLECAVVDGMT
ARVLARVGGERMLTDLRHVGEALHRVAVEERLGVVGLLAWLREQVADEKVEVASERTRRL
DSDAAAVQLVTIHGAKGLQYPIVYLPSLWDRFTGRDPEVPLFHDDLGQRCRDVGGPGPHR
RDSLRRHWAEDAGESLRLLYVALTRAESQVVAWYAPAGKNTPGSALHRMLCGRRPGGSAV
PDEWDLVPEEQLAWILGQWMGAGGPTREVAVHEPPGDERLEQSSDALAARRFTRTVDTDW
RRTSYSALSAAAHAHGLTPDRSLSEPEIEPEVEDAALLELDPPAGEPEELALMEVPSPMA
DLPVGATFGSLVHAVLEHADPGADDREAELRRHLAEQRVWWPVDLDADVLVAALLEVWDS
PLGELAGETTLGEIAVSDRLTELNFELPLAGGDDVRYARAADQVRLGDLAPLLRRHLPAG
DPVTTYADTLDADPDLAAQPLRGYLTGSIDVVLRVPVEGQTRYLTVDYKTNHLGEPDVPL
TARDYRPSVLDEAMGHSDYPLQALLYTVVLHRYLRWRLPGYDPATHLGGVLYLYLRGMSG
ADTPRVDGRPCGVFSWRPPVELVEELSDLLDGVRRGAT
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgacgaggtcttccggatcagcgacccgctgccgtccggcaccactctgctcgag
gcgagcgccggcacgggcaagacgtggaccatcgcggcgctggtgacgcggtacgtcgcc
gagggggtcgccaccctcgacgagctgctggtcgtcaccttcacccgcgccgcctcccaa
gagctgcgcgagcgggtgcgggcccagctggtcgaggcccagcgggcgctcgccgagccg
ccgccggagcccgagcgcaccgagctgatccgacacctgctcgacgacaccgaggacggc
gtccggctcaagcaccgccggctcaccgacgcactcaccgccttcgacgccgccaccatc
gcgacgatccaccagttctgccagctggtgctccgcagcctcggggtggccggcgacacc
gaccggcaggcccggctggtggaggacctcgagcagctgaccgacgaggtggtcgacgac
ctctacctcgcccgctggtcgggcgagcgcacgccgccgtggacccgcgcccaggccggc
gagctggcgcgggccgtggtcgacgacccgcgcgcccgggtcgccccccaggccgcgctg
gaggacgcgccggagagccaggtcgcgatgcgggtccggttcgccgccgaggtgatcgag
gagatcgaccggcgcaagcgccggctgggcatcctcagctacgacgacctgctgggccag
ctcgcggacgcactgaaggaccccgacgccccggcccgcgcgcggatgcgccagcggtgg
aaggtcgtcctcatcgacgagttccaggacaccgacccggtccagtggcaggtcttcgag
cgcgcgttccacggcgcggcgacgctgatcctgatcggcgacccgaagcaggcgatctac
gccttccgcggcggggacgtggtcacctacctcgcggccgcgcaggcggcgacccgacgc
cagacgctgggcgtcaactggcgctcggacgcggcgctgctcgactccctgcaggtgctc
ctgcaggaggcgcggctcggcgacgagcagatcgtcgtgcgcccggtgcaggccgaccgg
cccggctcccggctggagggggcgggggctccgttccggctgcgggtggtgcgcaacgcc
gacatcggcgccggcccgcgagcgcggccgcgggtggaccgctggcgcgagcacgtggtc
gccgatctcgcccgggacgtcaagcgactgctcacctccggggcgaccctcgacgggcgg
cccgtgcgcgccggcgacgtggcggtgctggcgcaccgtcgcgacatgctgaccgccgtg
caggccgccctggccggcgtcggggtgcccgccgtggtcaacgccggcggctcggtcttc
cacacccccgccgcgcgggagtgggtcacgctgctggagtcgctcgagcagccgcaccgc
tcggaccgggtccgcgccgccgcgctcacctccttcgtcggcctggacgcgaccgagctg
gactccggcggcgacgagctcgacgaccggctggccgaccgggcgcgcgcctggcagggc
gtcctggccaaccgcggggtcgccgcggtgctggagtgcgccgtggtcgacgggatgacc
gcgcgggtcctggcccgggtcggcggggagcggatgctcaccgacctgcggcacgtcggt
gaggcgctgcaccgggtcgccgtcgaggagcggctgggcgtcgtgggcctgctcgcgtgg
ctgcgcgagcaggtggccgacgagaaggtcgaggtcgcctccgagcggacccgccggctg
gactccgacgccgcggccgtccagctggtcacgatccacggcgcgaaggggctgcagtac
cccatcgtctacctcccctccctgtgggaccggttcaccggacgcgacccggaggtgccg
ctcttccacgacgacctgggccagcgctgccgggacgtcggcggccccggcccgcaccgc
cgtgactccctgcggcggcactgggccgaggacgcgggggagtcgctgcggctgctctac
gtcgccctcacccgggcggagtcccaggtggtcgcgtggtacgcccctgcggggaagaac
accccggggtcggcgctgcaccggatgctgtgcgggcgacggccgggcggatccgccgta
cccgacgagtgggacctggtgcccgaggagcagctcgcctggatcctcggtcagtggatg
ggggccggcgggccgacccgcgaggtcgcggtgcacgagccgcccggcgacgagcggttg
gagcagtcctccgacgcgctcgcggcgcggcggttcacccggacggtggacaccgactgg
cgccgtacgtcctactccgccctctccgcggcggcccacgcgcacgggctgacgccggac
cggtcgctgtcggagccggagatcgagcccgaggtggaggacgccgcgctgctcgagctc
gacccgccggccggggagccggaggagctggcgctgatggaggtgccctccccgatggcc
gacctgccggtgggggcgaccttcggctcgctggtgcacgccgtgctggagcacgccgac
cccggcgccgacgaccgggaggcggagctgcggcggcacctcgccgagcagcgggtctgg
tggccggtcgacctggacgccgacgtgctcgtcgccgcgctgctggaggtctgggacagc
ccgctcggcgagctcgcgggggagacgacgctgggggagatcgcggtttccgaccggctg
acggagctgaacttcgagctgccgctggccggcggggacgacgtccgctacgcccgggcc
gccgaccaggtccggctgggggacctcgcccccttgctgcggcggcacctgcccgccggc
gacccggtgacgacgtacgccgacaccctggacgccgacccggacctggccgcgcagccg
ctgcggggctacctcaccgggagcatcgatgtcgtgctgcgcgtgccggtcgagggtcag
acccgctacctcaccgtcgactacaagaccaaccacctcggcgagccggacgtgccgctg
accgcgcgggactaccgaccctcggtgctggacgaggcgatggggcactccgactatccg
ctccaggcgctgctctacaccgtcgtgctgcaccgctacctgcgctggcggctgcccggc
tatgaccccgcgacccacctcggcggggtgctctacctctacctgcgcgggatgagcggt
gcggacacgccccgggtcgacggccggccctgcggggtcttctcctggcggccgcccgtg
gagctggtggaggagctgtccgacctgctcgacggcgtccggaggggggcgacatga
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