Nitratifractor salsuginis: Nitsa_0460
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Entry
Nitsa_0460 CDS
T01405
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nsa
Nitratifractor salsuginis
Pathway
nsa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Nitsa_0460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsa03019
]
Nitsa_0460
03016 Transfer RNA biogenesis [BR:
nsa03016
]
Nitsa_0460
Enzymes [BR:
nsa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Nitsa_0460
Messenger RNA biogenesis [BR:
nsa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Nitsa_0460
Transfer RNA biogenesis [BR:
nsa03016
]
Prokaryotic type
tRNA degradation factors
Nitsa_0460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
PNPase
S1
Ribosomal_L6
Chlam_vir
Motif
Other DBs
NCBI-ProteinID:
ADV45730
UniProt:
E6X0E1
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All DBs
Position
471870..474059
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AA seq
729 aa
AA seq
DB search
MQEKIIEITSNGLQESFTLGKVARQTDGSVLYRQGKTMILATVVSSDKAVHEPFLPLTVQ
YIEKAYAAAKIPGGFVKRESKPSDFETLTSRIIDRSLRPLFPEDFAYPTVITVLVLSADS
EVDLQVAALHAANAALLVSDLPVERSVAAVRLGKIDGERRLNPPLSRMEESALDLLLVGS
GEELLMIEMAAKATEVIEVEEIPEPELLMGPMPVLLPHQESNELPEEELIALIGEARGEI
AEACRRYEEALRPFKAEIREFPPVIDRAELEDLTALVREQFSDRIASALAGLSKSERADI
IDEVVQEVEAYLVEHGIHREPLVVYRAIEAVKREMLRRQILEEGVRPDGRKPDEVRPISI
ETNLLPSVHGSCLFTRGETQALATVTLGEGKEGQLYELLTERSPRTERFMVHYNFPPFCV
GEARPIGAPSRRELGHGNLAKRALEPVIDRELSRTIRLVSEILESNGSSSMATVCAGSLA
LVSAEAEISALVAGVAMGLVKEGDRHRVLTDIMGLEDHDGDMDFKVAGTRKGITAMQLDI
KLGGLDLEILSEALTQAKKARFHILDLMEEAQKSIVPSAALPVAEHFHIDPSKIVHVIGK
AGSTIREIIEKFEVKIDMDREKGKVKVTGADREKVKAAREHIEGIASREEPKVPKYEVGA
TYQGTVKRIADYGLFVELPGADTMRCSIAPKCRAKALQISNRVMRSKSRYSVSRIARWSW
LFPNIRVER
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaaaaataatcgagatcacaagcaacggattgcaggagagttttaccctgggc
aaggtggcacgacaaaccgacggttccgttctctatcgccaggggaaaactatgatcctt
gccacagtggtcagcagtgacaaagcggtccatgaaccctttttgcccttgacggtccaa
tacatagaaaaggcttacgccgcggcgaagattccgggaggttttgtcaagcgcgaaagc
aagcccagcgacttcgaaacactcacatcgaggatcatcgaccgttctctgcgtcccctt
ttccccgaggatttcgcctatcccacggtgatcaccgtgttggtgctcagcgccgattct
gaggtggatcttcaggtggcggcgcttcacgcggccaatgctgcccttctggtctccgat
cttcctgtggaacggagcgtagcggcggtccgactgggcaagatcgacggagaacgccgg
ctcaaccctcctttgagccggatggaagagagtgcgctggatctgctgctggtaggaagc
ggtgaagagctgctgatgatcgaaatggcggccaaagccacagaagtcatcgaagtcgaa
gagattcccgagcccgagcttttgatggggccgatgccggtgctgcttccccatcaggag
agcaacgagttgccggaggaggagctgatcgctctgatcggggaagcccggggggagatc
gccgaagcgtgtcgccgttacgaagaggccctgcggcctttcaaggctgagatccgggag
ttccctcctgtgatcgaccgggccgagctggaggatttgacggcgctggtgcgtgagcag
ttcagcgatcggatcgcttcagccctcgcgggtctctccaagagtgaacgcgccgacatt
atcgacgaggtggtgcaggaggtggaggcttatctcgtcgagcacgggatccaccgggag
cccctggtcgtctaccgcgccatcgaagcggtcaagcgggagatgctccgccgtcaaatc
ctggaggagggggtacgtcccgacggacggaagccggatgaggtgcggcccatcagtatc
gagaccaatctcctgcccagtgtccacggctcctgcctctttacccgcggggagactcag
gctttggccacagtgaccctgggagagggcaaagaggggcagctttatgagttgctcacg
gagcggagtccgcggacagagcgttttatggtccattacaacttcccgcccttctgtgtg
ggggaggcccgtcccatcggggcccccagccgaagggagctggggcatggcaatctggcc
aaacgggcgttggagccagtcatcgaccgggaactctcccggaccatccggctggtctcc
gagatcctggagagcaacggttcctcctctatggccacggtctgtgccggttctctggcc
ctggtctcggccgaggcggagatcagcgcgctggtggccggtgtggctatggggctggtc
aaagagggggaccgccatcgggtcctgaccgatattatggggctggaggatcacgacgga
gatatggatttcaaagtcgcgggcacccgcaaagggatcacggcgatgcagttggatatc
aagctgggcggtttggatctcgagattctcagcgaagcgctgacccaggcgaaaaaagcg
aggttccatatcctggacctgatggaggaggctcaaaagagtatcgtgccgagtgccgcg
cttcccgtcgccgagcacttccatatcgatccttcaaagatcgtccatgtcatcggcaag
gcgggaagcacgatccgggaaatcatcgagaagttcgaagtcaagatcgacatggaccgc
gagaagggcaaagtcaaagtgaccggcgccgacagggagaaggtcaaagccgccagggaa
cacatcgaggggatcgcgtcccgagaggagcccaaggttcccaaatacgaagtgggcgcg
acctatcaggggaccgtcaagcggatcgccgattacgggctttttgtggaactgcccggc
gcggatacgatgcgctgctccatagctccaaaatgccgggcaaaagccctgcagatttcc
aaccgggtgatgcgatcgaagtcaaggtactcagtcagcaggatcgcaaggtggagttgg
ctcttcccgaatataagggttgagcgctga
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