Nostoc sphaeroides: GXM_06486
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Entry
GXM_06486 CDS
T06325
Name
(GenBank) holB, DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
nsh
Nostoc sphaeroides
Pathway
nsh03030
DNA replication
nsh03430
Mismatch repair
nsh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GXM_06486
03430 Mismatch repair
GXM_06486
03440 Homologous recombination
GXM_06486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsh03032
]
GXM_06486
03400 DNA repair and recombination proteins [BR:
nsh03400
]
GXM_06486
Enzymes [BR:
nsh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GXM_06486
DNA replication proteins [BR:
nsh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GXM_06486
DNA repair and recombination proteins [BR:
nsh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GXM_06486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Minor_capsid_3
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QFS48992
UniProt:
A0A5P8W8U0
LinkDB
All DBs
Position
Gxm1:complement(5979241..5980053)
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AA seq
270 aa
AA seq
DB search
MELLFSNEMGVTAALQNRLRQGNHPSLLWVQPTYQYQGQRLTAAEAAEKGLKRKAPPVIR
LEQIREITEFLSRPPLEAPRNVVVLEEAQTMAEAAANALLKTLEEPGQATLILIAPTLES
VLPTLVSRCQRIPFYRLDAQSLAVVLTQTGHQEILSNQAVLSIASGSAGSAIASYEQLQA
IPSELLEDLKKAPASYRKALELAKKIDKDLDTEAQLWLIDYLQQFYWQQWHQPSIINQLE
QSRKYLLSYAQPRLVWECLLLSVCSIVKAS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
gtggaattgctattttctaatgagatgggagtcactgcggctttacaaaaccgtttgcgt
caagggaaccatccatctttgttgtgggtgcaaccgacgtaccaataccagggacaacga
ttaacagcagcagaagcggccgaaaaaggacttaagcgtaaagcaccacctgtaattcgg
ctagagcaaattcgggaaattaccgagtttctcagtcgtccacccttggaagcaccaagg
aatgtggtagtgctggaagaagcccaaacaatggcagaagcagcagcaaatgctttactt
aaaactttagaagaaccaggacaggcgacgttaattttaattgcacctaccttagagtct
gttttgccaactttggtatcacgctgtcaacgcattcctttttatcgcttagatgcacag
tctttggctgttgtactcacacaaactggtcatcaagaaattttgtcaaatcaggcagta
ttgagcatagcatctggcagtgccggaagtgcgatcgcatcttacgagcaattacaagct
attccttcagagttactcgaagacttaaaaaaagctcctgcttcttaccgcaaagccttg
gagttagccaagaaaattgataaagatttagatacagaagcccaactgtggttaattgat
tatcttcagcaattctactggcagcagtggcatcaacccagcatcatcaaccagctagaa
caatctcgtaaatacttactttcttacgctcaaccacggctagtttgggaatgtctgctt
ttatctgtatgctcaattgtcaaagcttcatag
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