Nostoc sphaeroides: GXM_08605
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Entry
GXM_08605 CDS
T06325
Name
(GenBank) rpoS, RNA polymerase nonessential primary sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
nsh
Nostoc sphaeroides
Brite
KEGG Orthology (KO) [BR:
nsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsh03021
]
GXM_08605
Transcription machinery [BR:
nsh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GXM_08605
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_10
Sigma70_r4_2
Amidase_3
HTH_17
Motif
Other DBs
NCBI-ProteinID:
QFS51111
UniProt:
A0A5P8WEX4
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All DBs
Position
Gxm2:complement(1477270..1478220)
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AA seq
316 aa
AA seq
DB search
MSSLSSDMVRIYLQEIGQYPLLKPEEEIAYARLVQEMIAIEQSKNELTQQLDREPTMTEL
ANAVEKTEAQVRAELHLGQKAKQKMVTANLRLVVSVAKKYQNRNLEFLDLIQEGAIGLQK
GIEKFDPNRGYKLSTYAYWWIRQEITRAIAEQSRTIRLPIHLTEILNKIKKVQRESFQKL
GRHATAEEVATLLNISTDKLREYLTASRTAISLNKQVGDEQETELGEILADVGVSPETLL
TQELLSQDVAKLLEPLTPIQRQVLTLSFGLENDQHFNLAQIGQQLNLSRERIRQIQVKAI
SILRHHQNDIQEYLFD
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcctcagttcagacatggttcgcatctatttgcaggaaattggtcagtatcct
ttattgaagccagaggaagaaattgcttatgcaagacttgtacaagaaatgattgccatt
gagcaatctaaaaatgaactcactcaacagctagaccgtgaaccaacaatgacagaatta
gccaatgctgtcgaaaaaaccgaagcacaagttcgagcagaactacaccttggccaaaaa
gctaaacaaaaaatggtgacagctaacctccgactagtagtttctgttgccaagaaatac
cagaaccgcaatttggaattcttagatttgatccaagaaggagcgatcggtttacaaaaa
ggtatagaaaagtttgacccaaaccggggctataagctatcaacctatgcctactggtgg
attcgtcaggagattacacgcgctatagcagaacaatcgcgcactattagattacctatt
catctcactgaaatacttaataaaattaagaaggtgcagcgagaaagctttcaaaagctc
ggtcgtcatgccactgctgaagaagttgcaacactcttaaacataagcacagataagctt
cgagaatatctcacggcctctcgtacagccatttctttaaataaacaagtcggagatgag
caagagacagaattgggcgaaatcttagcagacgttggtgtttcaccagagacacttctc
acccaagaacttctatcccaagacgtggctaaactcttagaaccactgacacctatacaa
cgtcaagtgttgactttaagttttgggctagagaacgatcagcatttcaatctcgctcag
attggccaacagctaaacctcagccgagagcggattcgtcaaatccaggtcaaagctata
agtattctccgccatcatcaaaatgacattcaagagtatttatttgattaa
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