Neisseria mucosa FDAARGOS_260: A6J88_04955
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Entry
A6J88_04955 CDS
T04958
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
nsi
Neisseria mucosa FDAARGOS_260
Brite
KEGG Orthology (KO) [BR:
nsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nsi03009
]
A6J88_04955
Enzymes [BR:
nsi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
A6J88_04955
Ribosome biogenesis [BR:
nsi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
A6J88_04955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_15
TRAM
Methyltransf_25
Met_10
MTS
UPF0020
Methyltr_RsmB-F
PrmA
Cons_hypoth95
PCMT
Methyltransf_11
RrnaAD
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
AVI44908
LinkDB
All DBs
Position
983613..984989
Genome browser
AA seq
458 aa
AA seq
DB search
MPCRAKWIFLMKMRTDNRQYEGEADIFSLDYEGRGVARVNGKALFIEGAIPGERVRFEII
RSKKQFDEARVIDITRYSENRVEPKCRYFDTCGGCSIQHIDSTAQIAFKQRIMEEQLERI
GKIRPKQILPAIYGTPWHYRERARLSISKDAGGRLKIGFKAKKSHEVIDVDSCMVLPAHI
SEKLPKIKQMLQSLIDLDLLFIEFFNSEKLTVLNICSGKKPPSQKLRQLEKWFDTIFGHE
KKQWQIWLQARRQEAQPFYPKDCQPLGYALPEFEVEMPYKPGDFTQINAGLNGVMVGRAL
KLLDIQKNERIADLFCGLGNFSIPMAKSGAEVVGIEGEGSLVKRARNNASANGCSDRVSF
FEADLFETDEVVVASWGQFDKILLDPPRGGAYAVVKSLHAPYLPVRIVYVSCNPATFARD
AEVLVNKGYKLKLAGVMNMFAQTSHVESIGVFDLENSI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgccctgtcgggcaaaatggattttcttgatgaagatgcggacagataacaggcaatat
gagggcgaggcggatattttttctttggattatgaaggaagaggtgtcgcgcgcgttaat
ggtaaggcattgtttattgaaggagcgataccgggtgagcgggtacggtttgaaatcatc
cgttcaaaaaaacaatttgatgaggcacgggtcattgacatcacccgatattcggaaaat
cgagttgagccgaagtgtaggtattttgatacatgcggtggttgttcaatacagcacatt
gattcgacagcccagattgcatttaaacaacgcattatggaagagcagttggaacgcatc
ggcaaaatccgacccaagcagattctcccagctatatatggaacaccatggcattatcgg
gagcgtgccagactgagtatttcaaaggatgcaggtggtcgtctgaaaatcggttttaag
gcaaaaaagagtcatgaagtgattgatgtcgattcatgtatggtgttgccggctcatatt
tctgagaagttgccaaaaataaagcaaatgttgcaaagtttgatagatttggatttgcta
ttcattgagttttttaatagcgaaaaactaacggttttgaacatttgttccggaaaaaaa
ccgcctagtcaaaaattgagacaacttgaaaaatggtttgatacgatattcggtcatgag
aaaaaacagtggcagatttggctgcaagcccgaagacaggaggcccagccattctatccg
aaagattgtcagcctttgggatatgctttacctgagtttgaggttgaaatgccgtacaaa
cccggggattttacccagattaatgcaggcttaaatggagtgatggttggcagggctttg
aaacttctagatattcagaaaaacgagcgtattgcagatttgttttgcgggcttggaaac
ttcagtattcctatggcaaaaagtggggctgaagtggttggaatcgaaggtgaaggttcg
ttggttaagcgagcacgaaacaatgcttcggctaacggttgttccgatagggtatccttc
tttgaagcggatttgtttgaaacagatgaggttgtggtagcgtcatggggtcaattcgac
aagatattgcttgatcccccgagaggcggtgcctatgctgttgtcaaatcactacatgct
ccgtatttgccggtaaggatagtatatgtttcttgcaatccggcaacctttgccagagat
gcggaagtgctggtaaataagggctataagctgaaattggcaggggtaatgaatatgttt
gcacagacttcgcatgtcgaatctataggtgtcttcgatttggaaaatagtatatag
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