Nocardia mangyaensis: BOX37_06700
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Entry
BOX37_06700 CDS
T04582
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
nsl
Nocardia mangyaensis
Pathway
nsl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BOX37_06700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsl03019
]
BOX37_06700
03009 Ribosome biogenesis [BR:
nsl03009
]
BOX37_06700
Enzymes [BR:
nsl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
BOX37_06700
Messenger RNA biogenesis [BR:
nsl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BOX37_06700
Ribosome biogenesis [BR:
nsl03009
]
Prokaryotic type
rRNA processing factors
BOX37_06700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
IF2_N
PCB_OB
DnaJ_CXXCXGXG
Fim-adh_lectin
Motif
Other DBs
NCBI-ProteinID:
APE33708
UniProt:
A0A1J0VNU2
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All DBs
Position
1492940..1496161
Genome browser
AA seq
1073 aa
AA seq
DB search
MAEKEPLDTTQQDADQLPERIRVHALAKRLGVTSKRILAKLAELGTEARSVQSNVDRAVA
ETVRDAIAAADAESGESPAAPTKAPAAPTTSAAEQPADSTSAPSLFSAPEVARTDEVFAA
MADDAHTGLFTHRPTDAPAPAEPVSFEAPAVAAPLFLPPDATAAEEARKRRRAERTPKRT
EEPAPAPVEEAVVEPEPAEDESDADQSDATDQSGDNDADGQPRRRRRGRRGRGRGRGEQS
ADGDDADGDGDSDSEAADTDDDTTASTEAGTEEAEQATDTDADSDDEDGSLPEGASRRRR
RRRRRKVGGDSGEAEAASEDDPPNTVVHEREPRNKSRGRSSSGSSDEVQGISGSTRLEAK
RQRRRDGREAGRRRPPILTESEFLARREAVDRVMVVREKAFDPAEHAPGHQTTTQVAVLE
DNILVEHFVTSSGQASMVGNVYLGRVQNVLPSMEAAFIDIGRGRNGVLYAGEVNWEAAGL
GGKERKIEQALKPGDQVLVQVSKDPVGHKGARLTTQISLAGRFLVYVPGGTSTGISRKLP
DTERKRLKEILREIVPADAGVIIRTASEGVSEPELARDVERLQATWRTIEEASKNAKDSN
APKALYEEPDMLVKVIRDLFNEDFAKLVIEGERAWSTVENYVRTVAPDLLPRVNRHENNN
GVDVFDAYRIDEQLAKALDRKVWLPSGGTLVIDRTEAMTVVDVNTGKFTGSGSSNLEETV
TKNNLEAAEEIVRQMRLRDIGGMIVVDFIDMVLESNRDLVLRRLTEALGRDRTRHQVSEV
TSLGLVQMTRKKLGTGLVEAFSTTCEHCHGRGIIVHSYPVDAGSGVEEPRAKEGGSRRRR
GKDKDRDKAPAAAAAPATNGTAPAAEHDEEDIAVKRAHPVALAMAAHHGDEGEPTEEATA
QTEAAEEAVAEPTRSRSRSRSRRASRNAAAQAEAAESPALTGVLAAEPEPGTEEPEPVAA
EEPEQAEPAAVESTSLAEVAPVAEVMQPEPVTQSETAPAAEQPPARAPRRRRVARSTAAP
ASDSTGAVFVLSANEQPAAAVVDIAAEPVVVPERKPRRRAVGRPAGAPTSESN
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaaaaagagccgctggacacaacacaacaggatgccgatcaattgccggagcga
attcgagttcatgcactggccaagcggttgggagtaaccagcaagcgcatcctggccaaa
ctggccgaactgggcaccgaggcccgcagcgttcaatcgaatgtcgatcgcgcggtcgcc
gagaccgtgcgcgacgcgatcgccgccgctgacgccgaatccggcgaatccccggcagcg
ccgacgaaggcgcccgccgcccccaccacatccgccgccgagcaaccggccgactcgacc
agcgcgccgtcgctgttctccgcgcccgaggtcgcgcgcaccgacgaggtgttcgccgcg
atggccgacgacgcgcacaccggtctgttcactcaccggcccaccgacgcccccgcgccg
gccgagccggtgagcttcgaggcgcccgctgtggccgcgccgctgttcctgccgccggac
gccaccgccgccgaggaggcgcgcaagcgtcgccgcgccgagcggacccccaagcggacc
gaggagccggccccggcacccgtcgaggaagccgtcgtcgagcccgaaccggccgaggac
gagtccgacgccgatcagtccgatgccaccgaccagtccggcgacaacgacgccgacggt
cagccgcgtcgccgtcgtcggggccgtcgtggccgcggtcgcggccggggcgagcagtcc
gccgatggcgacgacgccgacggcgacggcgacagcgacagcgaggccgccgacaccgac
gacgacaccaccgcgtcgaccgaggccggcaccgaagaggccgagcaggccaccgacacc
gatgccgacagcgacgacgaggacggatcgctgcccgaaggggcgagccgtcgtcgccgt
cgtcgccgccgccggaaggtcggcggggattccggcgaggccgaggcggcctcggaggac
gatccgcccaacaccgtcgtgcacgagcgcgagccccgcaacaagagccgtggccgttcc
tcctcgggttcgtccgacgaggtacagggcatctccggttccacccggctcgaggccaag
cggcagcgtcggcgtgacggccgcgaggccgggcgtcgtcgtccgccgatcctgaccgag
tcggagttcctggcccgccgtgaggcggtcgaccgggtcatggtcgtgcgcgagaaggcg
ttcgatccggccgagcacgcgccgggccaccagaccaccacccaggtggcggtgctcgag
gacaacatcctcgtcgagcacttcgtcaccagctccggtcaggcgtcgatggtgggcaat
gtctacctcggccgggtgcagaacgtgctgcccagcatggaggccgcgttcatcgacatc
ggccgtggccgcaacggcgtgctctacgccggtgaggtgaactgggaggccgccgggctc
ggcggcaaggagcgcaagatcgagcaggcgctcaagcccggcgatcaggtgctggtgcag
gtgtccaaggacccggtgggtcacaagggcgcccgcctgaccacccagatcagcctggcc
ggtcgcttcctggtgtacgtgcccggcggtacttccaccgggatcagccgtaagctgccc
gataccgagcgcaagcggctcaaggagatcctgcgcgagatcgtgcccgccgacgccggg
gtgatcatccgcaccgcgtccgagggcgtgagcgagccggaactggcccgcgacgtcgag
cggctgcaggccacctggcgcaccatcgaagaggcctcgaagaacgccaaggactccaac
gcgcccaaggctctctacgaagagcccgacatgctggtcaaggtcatccgcgatctgttc
aacgaggacttcgccaagctcgtcatcgagggcgagcgcgcgtggagcaccgtcgagaac
tacgtgcgcaccgtcgcgccggacctgctgcctcgggtgaaccggcacgagaacaacaac
ggtgtcgacgtgttcgacgcgtaccgcatcgacgaacagctcgccaaggcgctcgaccgc
aaggtgtggctgccctcgggcggcaccctggtgatcgatcgcaccgaagcgatgaccgtc
gtcgacgtcaacaccggcaagttcaccggttcgggttcgtcgaacctcgaggagacggtc
accaagaacaacctggaggccgccgaggagatcgtgcgccagatgcggctgcgcgacatc
ggcggcatgatcgtggtcgacttcatcgacatggtgctcgagtccaaccgcgacctggtg
ttgcgcaggctcaccgaggcgctgggccgggatcgcacccgccaccaggtctcggaggtc
acctcgctcggcctggtccagatgacccgcaagaagctgggtaccggcctggtcgaggcg
ttctccaccacctgcgagcactgccacggccgcggcatcatcgtgcactcctacccggtg
gacgccgggtccggtgtcgaggagccgcgtgccaaggagggcggttcgcgccgtcgtcgc
ggcaaggacaaggacagggacaaggcaccggccgcggccgccgcaccggccaccaacggc
accgcaccggccgccgagcacgacgaggaggacatcgcggtcaagcgggcccacccggtc
gcgctcgcgatggccgctcatcacggtgacgaaggcgagcccaccgaggaggcgacggcg
cagaccgaagccgccgaggaagccgtcgccgagccgaccaggtcgcgttcgcgttcgcgt
tcacgtcgggccagccgcaatgccgccgcgcaggcggaggcggcggagagccccgcgctg
accggtgtcctcgcggcagagcccgagcctggcacggaggagcccgagcctgtcgcggcg
gaggagccggagcaggccgagcccgccgcggtcgagtcgacctcgctcgccgaggtcgcg
ccggtcgccgaggtcatgcagccggagccggtgacgcagtccgagaccgcacccgccgcc
gaacagccccccgcgcgggcgccccgcagacgccgggtggcccgttcgacggccgccccc
gcatcggacagcacgggcgccgtgttcgtgttgtcggcgaacgagcagcccgccgcggcg
gtcgtcgacatcgccgcggagcccgtggtcgtcccggaacgcaagccgcgccgtcgcgcg
gtgggtcgtcccgcgggcgcgccgacctccgaatcgaattga
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