Neotabrizicola shimadae: JO391_13690
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Entry
JO391_13690 CDS
T08148
Name
(GenBank) RNA pseudouridine synthase
KO
K06177
tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:
5.4.99.28
5.4.99.29
]
Organism
nsm
Neotabrizicola shimadae
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nsm03009
]
JO391_13690
03016 Transfer RNA biogenesis [BR:
nsm03016
]
JO391_13690
Enzymes [BR:
nsm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.28 tRNA pseudouridine32 synthase
JO391_13690
5.4.99.29 23S rRNA pseudouridine746 synthase
JO391_13690
Ribosome biogenesis [BR:
nsm03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
JO391_13690
Transfer RNA biogenesis [BR:
nsm03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
JO391_13690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
QYZ71973
UniProt:
A0A8G0ZXD4
LinkDB
All DBs
Position
2801858..2802505
Genome browser
AA seq
215 aa
AA seq
DB search
MEFDYDPPPDPPAILHIDDQIIVVDKQPGLLSVPGKLEGRQDCLESRLRAIHPDTLLVHR
LDCDTSGVMIFARTKKAQGFLGQEFEKRRAKKVYVARLWGHLHPDAGRVDLPICADWPNR
PKQMVSHDHGRPAQTDWQVTDRPPGETRVRLMPLTGRSHQLRLHMAELGHPILGDPIYAT
GPARDAPRLMLHAESLTLHHPADGRPVTFTAPCPF
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggaattcgactacgacccgccccccgatcccccggcgatcctgcacatcgacgaccag
atcatcgtggtggacaaacagccgggcctcctctcggtgcccggcaagctggaaggccgg
caggactgcctggaatcccgcctgcgcgcgatccaccccgacacgcttctggtgcaccgg
ctggattgcgacacctcgggcgtgatgatctttgcgcgcaccaagaaggcgcaagggttc
ctcgggcaggagttcgagaagcgccgcgcgaaaaaggtctatgtcgcgcgcctctggggc
cacctgcaccccgacgcgggccgcgtggacctgcccatttgtgccgactggccgaaccgc
ccgaaacagatggtcagccacgaccacggccgccctgcccagaccgactggcaggtgaca
gaccgcccgcccggcgagacgcgcgtgcgcctcatgccgctgaccggccgcagccaccag
ctgcgcctgcacatggccgaactcggccacccgatcctcggcgatcccatctacgccacc
ggccccgcccgcgacgccccgcgcctgatgctgcacgccgaaagcctgacgctgcaccac
cccgccgacggccgccccgtcaccttcaccgcgccctgtccgttctga
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