Niabella soli: NIASO_04005
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Entry
NIASO_04005 CDS
T03682
Name
(GenBank) (dimethylallyl)adenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
nso
Niabella soli
Brite
KEGG Orthology (KO) [BR:
nso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nso03016
]
NIASO_04005
Enzymes [BR:
nso01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
NIASO_04005
Transfer RNA biogenesis [BR:
nso03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
NIASO_04005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AHF14577
UniProt:
W0EUX2
LinkDB
All DBs
Position
complement(888819..890249)
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AA seq
476 aa
AA seq
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MLDLAITKIHDEQRQGESFAPFKSDPNTYQKQFYIESYGCAMNFADSEVVAAILNKEGFG
ATRNMEEADLIFINTCSIREKAEQTVRKRLTDFKKLKAEKPGMLVGVLGCMAERLKSKFL
EEEKLVDIVVGPDAYRSLPRLVDEASSGQKTVNVLLSREETYADIAPVRLNSNGVSAFVS
IMRGCNNMCSFCVVPFTRGRERSRDAVSIIAECTDLFEKGYREVTLLGQNVDSYHYIPEN
GTEQDAVSFANLLEKVALISPDLRVRFSTSHPKDITDDVLHTMAAYENICKCIHLPVQSG
STRVLQLMNRTYTREWYKGKVDRIRELLPGCSITADIIAGFCSEEETDHQETLSIMEYSR
YDLSYMFFYSERPGTLAQRRYKDDVPLEVKKRRLQEVIETQNRLSLENYTKDIGQTYKVL
IDGDSKRSAEDWVGRTSQNKVVIFPKAAGAAHKKGDYVSVAINDCTQATLFGSIVQ
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgttagatttagcgataacaaagatacatgatgagcagcggcagggagaatctttcgca
ccgtttaaaagcgaccctaacacctatcagaaacaattctacattgaaagttatggttgc
gcgatgaattttgctgatagtgaggtagttgcagctattttaaataaggaaggatttgga
gcgacccgcaatatggaggaagctgatctgatctttatcaatacctgttccattcgcgaa
aaagcagagcagactgtccgcaaacggctcaccgattttaaaaagctgaaagcggaaaag
cccggaatgctggtgggcgtgttgggctgcatggcagagcgactaaaatccaaattttta
gaagaggaaaaactggtggatatcgtagtaggcccggatgcctaccgtagcctgcccaga
ttggtggatgaagccagcagtggccagaaaaccgttaatgttctgctgagccgtgaggaa
acctatgcggatattgctcccgttcggttaaacagcaatggcgtaagtgcctttgtgagc
attatgcgcggatgcaacaatatgtgctccttttgcgtggttccttttaccaggggccgg
gaacgcagccgcgacgcggtcagtattattgcagagtgcactgatcttttcgaaaaagga
tatagagaagtaaccttgctggggcagaacgtggattcttaccattatatccccgaaaat
ggaacggagcaggatgccgtaagttttgcaaatctcctggaaaaggttgctttaatttcg
cccgacctgcgggtacggttctctacctcgcacccgaaggatattacagatgacgtgctg
cacaccatggcggcttatgaaaatatttgcaagtgtattcacctgcccgttcaaagcggc
tctacgcgtgtattacaattgatgaaccgtacgtatacccgggagtggtacaaaggtaaa
gtagaccggatccgggaactgttacccggttgcagcattaccgctgatattattgcaggc
ttttgctcggaagaggaaacagatcaccaggagaccctctctattatggaatacagccgg
tacgacctcagctatatgtttttctacagcgagcggcccggaaccctggcgcagcgccgg
tataaggatgacgtgcccctggaagtaaagaaacgacgcctgcaggaggtcatcgaaaca
caaaaccggctttctttggagaattatacaaaggatattggtcagacctataaagtgctg
atcgatggcgacagcaagcggagcgcggaagactgggtaggaagaacctcccagaataaa
gtggtcatatttcccaaagcagccggagcggcgcataaaaaaggggattatgtttcggta
gcaattaatgattgcacacaggctacgttgtttgggagtattgtgcaatag
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