Nocardia sputorum: IFM12276_64910
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Entry
IFM12276_64910 CDS
T09151
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
nspu
Nocardia sputorum
Pathway
nspu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
nspu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IFM12276_64910 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nspu01007
]
IFM12276_64910 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nspu03016
]
IFM12276_64910 (serS)
Enzymes [BR:
nspu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
IFM12276_64910 (serS)
Amino acid related enzymes [BR:
nspu01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
IFM12276_64910 (serS)
Transfer RNA biogenesis [BR:
nspu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
IFM12276_64910 (serS)
Prokaryotic type
IFM12276_64910 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
BDU03463
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All DBs
Position
7126051..7127313
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AA seq
420 aa
AA seq
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MIDLRFLRDDPDAVRASQRARGEDPALVDALLEADAARRAAVATADNLRAEHKAMGKLIG
KASKEERSALLAQASEMSVKVKEAEAAQHAADSDLDAAHRAISNVVQEGAPAGGEDDYVV
LQTIGTPTEFDFEPKDHLELGESLGLIDMERGAKVSGARFYFLTGYGALLQLGLLQLAAQ
KAVANGFTMMIPPVLVRPEVMAGTGFLGQHSAEVYHLADDDLYLVGTSEVPLAGYHSDEI
LDLSGGPKRYAGWSSCFRREAGSYGKDTRGIIRVHQFDKVEMFVFTTPDQADAEHQRLLA
WEQEMLAAIEVPYRVIDVAAGDLGSSAARKFDCEAWVPTQQTYRELTSTSNCTTYQARRL
AVRYRDENGRPQIAATLNGTLATTRWIVAILENHQQADGSVRVPPALVPFVGTDVLRPAN
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacctccgattcctgcgggacgaccccgacgcggtccgcgcctcgcagcgcgcc
cgcggcgaagaccccgccctcgtcgacgcgctgctcgaggcggacgcggcgcggcgtgcc
gcggtggccaccgcggacaacctgcgcgccgagcacaaggcgatgggcaagctgatcggc
aaggcgagcaaggaggagcggtccgcgctgctggcgcaggcgtcggagatgtcggtcaag
gtcaaagaggccgaggccgcgcagcacgccgccgactcggacctggacgccgcgcaccgc
gccatctcgaacgtggtgcaggagggcgcgcccgcgggcggcgaggacgattacgtcgtg
ctgcagaccatcggcacgccgaccgagttcgacttcgagccgaaggaccacctcgagctc
ggcgagtcgctcggtctgatcgacatggagcgcggcgccaaggtctccggcgcccggttc
tacttcctgaccggctacggcgcgctgctgcagctcggcctgctgcagttggccgcgcag
aaggccgtggccaacggcttcaccatgatgatcccgccggtgctggtgcgccccgaggtc
atggcgggcacggggttcctcggccagcactcggccgaggtctaccacctcgccgacgac
gacctctacctggtcggcacctcggaggtgccgctggcgggttaccactcggacgagatc
ctcgacctgagcggcggcccgaagcggtatgcgggctggtcctcgtgtttccgccgggag
gcgggcagctacggcaaggacacccgcggcatcatccgggtgcatcagttcgacaaggtg
gagatgttcgtcttcaccacgcccgaccaggcggacgccgaacatcagcgcctgctcgcg
tgggaacaggagatgctcgcggcgatcgaggtgccctaccgggtgatcgatgtcgcggcc
ggggatctcggcagctccgccgcgcgcaagttcgactgcgaggcgtgggtgcccacgcag
cagacctaccgggagctcacctcgacgtccaactgcaccacctaccaggcgcggcggctg
gccgtccgctatcgggacgagaacggaaggccgcagatcgccgccactttgaacggcacg
ctcgcgaccacccgctggatcgtggcgatcctggagaaccatcagcaagccgacgggtcg
gtccgggttccgcccgccctggttcccttcgtcggcacggacgtgctgcgaccagccaac
tga
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