Nicotiana sylvestris (wood tobacco): 104226802 Help Entry 104226802         CDS       T05026                                  Name (RefSeq) symplekin   KO K06100   symplekin Organism nsy  Nicotiana sylvestris (wood tobacco) Pathway nsy03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:nsy00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     104226802  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:nsy03021]     104226802    03019 Messenger RNA biogenesis [BR:nsy03019]     104226802 Transcription machinery [BR:nsy03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      104226802 Messenger RNA biogenesis [BR:nsy03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      104226802     U7-dependent histone pre-mRNA processing factors      104226802 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N Motif Other DBs NCBI-GeneID:  104226802 NCBI-ProteinID:  XP_009777180 UniProt:  A0A1U7WSG5 LinkDB All DBs Position Unknown AA seq 1333 aa AA seqDB search MAGGPMREQALPLLAAANNHGDLTVKLSSLKQLKDILLSAEPSHVAELFPYLIDLKSSPQ SLVRKCLIEVIEAVGMKAKEHSLVLMPVLFTCLKDTSSMVTKQSIVSGMKIYCGVLEELS YQFHRHGIVERWLDELWTWMVKFKDAVFGFLFEVGPIGTKLLALKFLETYILLFTPDTND SEKYVAQAKHGRSFNISWVVGHHPVLDPAVLTSDAKNTVGTLLDLLRSASSLPGLLTISV INSLAVIARRRPIHYNRIFSPLLDFDPNFEMTKGGHAASIRYSLRTAFLGFLRCTHPAIL ESRERLLKSLRAMNAGDAADQVLRQLDKMMRNNERASRDSRLNKDEQSSNHLPILGDPTK KRSTPLDNEDPSNNYDSTSKRVHYGPNNHIAPPVERNDSGKEYVNGVNPMVEQIIGMIGA LLAEGERGATSLEVLISELPPDLLADIVITNMKHLPKNPPPLARLGSLSLSRSSDSSNLS QVMAPIDSSLAPQAWVPGSQTPTSLSTATSTSLSEMSASTSLPSDSKRDPRRDPRRLDPR RTAVAVEVSSTLVAEDNTSAMQSAMLQSEMNPSSSSNIDIAVPLVSNSECMPTVYPKMET NPITAESSPTPGASLSAPQEEVHDDDLNEAIPDDKMDAVIHVPLSSPGKVEQELVPEVPS EVGVTDEIYSPLLETDQFSPPISTAATPEDACAELPPLPPFIELTHEQQRNMGKLAVEQI IDSFKKLKETDNKHTGMALLSRLVAQIDADADADVVVMMQRLIFSDNQYQKVHELAMHVL YHLHYLMLSDSVENSSPATALYEKFLLTVAKSLLDSLPANDKSFSRLLGEVPYLPESMMR LLVDLCSENYPGQYGRDGDRVTQGLGAVWSLILGRPPNRQACLDIALKCAIHPQDDVRAK AIRLVANKLYVLGDISDSIEQFAKNMFLSAVDQHVTDTEYSRSGTSVQRTGETGNQEASV SGSQISEPGLSENDSVKNAVSDSQVDSELSLAQAQRLISLFFALCTKKFSLLHLVFDNYA RAPKAVKQAVHRHMPVLIRAIGSSCSELLHIISDPPQGCENLLTQVLHILSEGTTPPPDL VAVVKRLYETKLKDATVLIPVLSSFSKSEVLPIFPRLVALPLDKFQIALARILQGSAHTG PALTPAEVLVAIHDINPERDGLPLKKVTDACSACFEQRTVFTQQVLAKALRQMVDQTPLP LLFMRTVIQAIDAFPTLVDFVMEILSKLVIRQVWRMPKLWVGFLKCVSQTQPHSFPVLLQ LPPPQLDSALNKYANLRSPLAAFANQPNIKNSLPRSTLVQLGLLNESNLRQPHLSSSMHA SEKGSSVHGTTLT NT seq 4002 nt NT seq  +upstreamnt  +downstreamnt atggccgggggaccaatgcgggagcaagctctaccgctactcgcagccgctaataaccat ggtgatttgacagtaaagctatcttcgttgaagcaactgaaagatatactgttatcagct gagccatcacatgttgctgagcttttcccttatttaattgaccttaagtcatcgccccaa agtctcgttcgcaaatgcctcattgaggtaattgaggcggttgggatgaaagcaaaagag cattcgttggtgttaatgcccgtgttattcacatgtttaaaagatacgagttctatggtg acaaagcaatcaattgtatctggcatgaaaatctattgtggcgtgttggaggaattatca tatcagtttcatcggcatggtatagttgagaggtggcttgatgagctctggacatggatg gtcaagttcaaggatgctgtctttggctttctttttgaggtaggcccaattggtacaaaa ctgctggcattgaagtttctcgaaacatatattttacttttcacaccggatacaaatgat tctgaaaaatatgtagcacaagctaaacatggacggagttttaatatttcatgggtagtt ggtcatcaccctgttcttgatccggctgttcttacatcagatgccaaaaatactgttggc actctattggatttattgcgctcagctagttctctccctggtttactaaccatttctgta attaatagtttggcagttatagcaaggaggcgacctatccattataaccgcattttttca ccattgcttgattttgatccaaactttgagatgacaaagggtggacatgctgccagcatt cggtattctctgagaactgcctttttaggatttctgaggtgtacacatcctgccattttg gagtcgagagaaagattgttaaaatcattgcgagcaatgaatgctggtgatgctgctgat caagttcttcggcaactcgataaaatgatgagaaataatgagcgagcctcacgtgattct agattgaacaaggatgagcagtcatcaaaccacttgcccattttaggtgatccaacaaag aagaggtcaactccattagataatgaagatccatctaataactatgattcaacttcaaaa agggttcactatggccctaacaatcacatagctccaccagttgagagaaatgattctgga aaggaatatgtcaacggggtgaacccaatggttgaacaaataattggcatgattggtgct ttgcttgcagaaggagaaaggggtgccacgtctcttgaagttctaatatccgagcttcct cctgatttattggctgatatagtcataactaatatgaagcacttgcctaaaaatccccca cctttagcacgacttggaagcttgtcattatctcggtcaagtgattctagtaatctatcc caggttatggcaccaatagattcctcattagccccacaggcttgggttcctggatcccag acacccacctctttatcaactgccacgagcacttcattatcagaaatgtctgcttccaca agtctcccttcagattcgaaacgtgatcctaggagggatccacggcgccttgacccaagg cgtacagctgtggctgttgaagtatcatcaactctcgttgcagaagataatacaagtgct atgcaatctgcaatgctgcaatctgaaatgaatccttccagttcatctaatattgacatt gcagtacccctggtgtcaaattctgaatgtatgccgactgtgtatcccaagatggaaaca aaccctatcactgctgaaagttcaccgacaccaggagccagtctgtcagctccccaggag gaagttcatgatgatgacctaaatgaagctattcctgatgacaagatggatgctgtgata catgttccactatcatctcctggcaaagtagaacaggaattggtgccagaagttccatct gaagttggagtgacagatgaaatttactctccattgctagaaacagatcaattttctccc cctatttcaactgctgcaacccctgaagatgcatgtgcggagttgcctccgcttccgcct ttcattgagctgacccatgagcagcaaagaaatatgggaaaactggctgttgaacagatt attgactcgttcaaaaaattaaaagagacagacaacaagcatacaggaatggcattactt tctcggttggttgcccagattgatgctgatgctgatgctgatgtagttgtgatgatgcaa aggcttattttctcagacaaccagtaccagaaggtacatgagcttgcaatgcatgtactt tatcatttgcactatctcatgttgtcggattcagttgaaaactcttcacctgctactgcg ctatatgagaagttcctcctcactgtggcaaaatcattgctagattctttaccagcaaat gacaagtcatttagtaggctccttggtgaagttccatatttacctgaatctatgatgaga ctgctagttgatttatgctctgaaaattatcctgggcaatatggccgtgatggtgaccgt gtaactcagggccttggtgcagtttggagtttaattttggggcgtccgcctaatcgtcaa gcatgcctggatatagctttgaagtgtgcaattcaccctcaggacgatgtcagagcaaaa gctattcgcctggtggcaaacaaactttatgtacttggtgacatttcagatagcatcgag cagtttgctaagaatatgttcttgtcagctgtagaccagcatgttacagatacagaatat tcccggtctggaacctcggttcagagaacaggagagacaggaaatcaagaagcctcagtt agtggttctcagatttcagagcctggattgtctgaaaatgattcagttaagaatgcagta tctgattctcaagttgattcagaattgtcattggctcaagcgcagcgtcttatctcatta ttttttgctctatgcaccaagaaattcagtcttctccaccttgtatttgataactatgca cgtgctcctaaggcagttaagcaggctgttcaccgtcatatgcctgttcttattagggct ataggctcttcgtgttctgaactgcttcatataatatctgatccacctcaaggctgtgaa aatcttttgacacaggtgcttcatattctctctgaagggacaactccgcctcccgaccta gttgcagttgtcaagcggttatatgaaactaaactgaaggatgcaactgtccttattccg gtgctctcctcattttctaagagtgaggttctacctattttcccaaggcttgttgctctt ccactggataagtttcagatagccctggctcggatattacagggttctgcccatacaggt ccagcactgaccccagcagaagtgctggttgcaatacatgacataaatcccgagagagat ggccttccacttaaaaaggtaacagatgcttgctcagcttgttttgagcagcgtactgtt ttcacgcaacaggtcctggcaaaagccttgagacagatggttgatcagactcctctccca ctgctcttcatgaggacagtgattcaggccatcgacgcctttcctactctggttgatttt gtgatggagatactctccaaactcgtgattagacaggtatggaggatgccaaagctttgg gtgggtttcttaaaatgtgtctcgcaaacacaaccacattcttttcctgtactactacag ttgccaccaccacagcttgatagtgccctaaacaaatatgctaatctccgaagtccactg gctgccttcgcaaatcagccaaacattaaaaactcacttcctagatcaaccttggtacaa cttggtcttttaaatgaatcaaatttgcggcaaccacatctctcatcttctatgcatgcc tcagagaaaggctcttctgtccatggaactacactaacgtga

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