Neurospora tetrasperma: NEUTE1DRAFT84322
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Entry
NEUTE1DRAFT84322 CDS
T03451
Symbol
NEUTE1DRAFT_84322
Name
(RefSeq) hypothetical protein
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
nte
Neurospora tetrasperma
Pathway
nte03022
Basal transcription factors
nte03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nte00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NEUTE1DRAFT84322 (NEUTE1DRAFT_84322)
09124 Replication and repair
03420 Nucleotide excision repair
NEUTE1DRAFT84322 (NEUTE1DRAFT_84322)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nte03021
]
NEUTE1DRAFT84322 (NEUTE1DRAFT_84322)
03400 DNA repair and recombination proteins [BR:
nte03400
]
NEUTE1DRAFT84322 (NEUTE1DRAFT_84322)
Transcription machinery [BR:
nte03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
NEUTE1DRAFT84322 (NEUTE1DRAFT_84322)
DNA repair and recombination proteins [BR:
nte03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
NEUTE1DRAFT84322 (NEUTE1DRAFT_84322)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSD
PH_TFIIH
Clathrin_lg_ch
Motif
Other DBs
NCBI-GeneID:
20830710
NCBI-ProteinID:
XP_009852369
JGI:
Neute_matA2_84322
UniProt:
F8MR25
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MAPIEIPRGQASYKKREGIITLTPDKTALIWSPLPGTGPPVISLSVSNITNLQQTPKTNP
KVVLRVVEKPKAPGADPAAYPFQFTHATEARNEADAIKDLLSQIIAELRGDDPSLPKPAK
SGPNGAGASAAMAMASAVNSKHLPFRWFEDDMLKADVELQQSLMKKDKALAHIYNDAKLS
KPDSLSDASFNSQFWATRISLLRAYAIELNQKKGSYNVLSTIKPRTENGELKLNINHEQV
QLIFQQHPLVKRIYNENVPKLTESEFWSRFFLSRLSKKLRGERITDNDNTDPLFDKYLEA
DNTMAVPAKITATSVPPIINIEGNEENQGGFRGGNLKDVEMRPRANIPIIKTLNSLSEKI
MANVAPTDVDPSATSYSKDGIADALSQQLALQDLRGDAEAQLIRLSVKDTSTFFTGNQPS
LTDQEAADARLYATQVPSDVLFEVQADMDTLDSDGRGGIDLHRSIGVDPDSDDESSALDS
KSGPKPQHVGSRAALRFAQNQILESMKSARSHLTTHGSHTNASEERPMSLPTDIAHRATL
TCATTAEFLKQFWTVFNSSDSSPEKQQELAYLADSLVRSKQRIEALAEEAEKRRQEIMEK
RKREIREYYQKTGRKAKWVPVGGGRDAVWAVFEGVVGGLERAVAVWEMVKSGRI
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggccccgattgagattccccggggacaggcctcttacaaaaaaagagagggcatcatc
acattaaccccagacaaaacagccctgatatggagccccttgccgggcactggcccaccc
gtcatctcactttccgtatccaacatcacaaacctccaacagacccccaagacgaatccc
aaggtcgtcttgagagtcgtcgagaaacccaaagcgcccggagccgatccggctgcctat
cccttccagttcacacatgccaccgaggccaggaatgaggccgatgccatcaaggatctt
ctctctcagatcattgctgagcttcgtggcgatgacccttctttacccaagccggcaaag
tctggccccaacggcgccggcgcctctgccgccatggccatggccagtgccgtgaactcg
aagcatttgccgtttcgctggttcgaagacgacatgctaaaggccgatgtagaacttcag
cagtccctcatgaagaaggataaggccttggcccatatatataacgacgcaaagctgtcc
aagccagattcattatcagatgcctccttcaacagccagttctgggccacccgcatcagc
ctgctacgtgcctatgccatcgagctgaaccagaagaagggctcgtataacgtcttatca
accatcaagccccggaccgagaacggcgagctcaagttgaacatcaaccatgagcaggtc
cagctcatcttccaacaacacccactggtcaagcgcatctacaacgagaacgtccccaag
ctcacagagtccgagttctggtcccgcttctttctcagccgtctatccaagaagctccgc
ggcgagcgcatcaccgacaatgacaacaccgaccccttattcgacaagtatctcgaagcc
gacaacaccatggccgtcccagccaagatcaccgccacgagtgtgccccccatcatcaac
atcgaaggcaatgaagaaaaccaaggtggctttaggggtggtaacctcaaagacgtcgaa
atgcgtccgcgcgccaacatccccatcatcaaaacgctcaactcgctctccgagaaaatc
atggccaacgtcgcccccacagacgtcgacccctccgccacctcctactccaaagacggc
atcgccgacgccctgtcccaacaactcgccctgcaagacctccgtggcgacgccgaggcc
cagctgatccggctttccgtcaaggacacctccaccttcttcacaggcaaccagccctcg
ctcaccgaccaggaagccgccgacgcgcgcctctacgccacccaagtcccctcggacgtg
ctcttcgaagtgcaagcggacatggacactctcgactccgacgggcgcggcggcatcgat
ctccaccggtccatcggggtcgatcccgactctgacgacgagagcagcgctctggactct
aaaagcggacccaagcctcaacacgtcggctcccgcgctgcgctaaggttcgcccagaac
cagatcctcgagagcatgaagtccgctcggtcgcacctcaccacccacggctcgcacacg
aatgcgtccgaagaacgacccatgtcgttgccgacggacattgcccaccgcgctacgcta
acctgcgctaccaccgccgaattcttgaaacagttttggacggtgtttaactccagcgac
agcagcccagaaaagcaacaagaattggcctacttggccgactcgctcgtacgctcgaaa
cagagaatcgaggcgctggctgaggaagcggagaagaggagacaggagattatggagaag
cggaaaagggagattagagagtattatcagaagacgggccgcaaggcgaagtgggttccc
gttggagggggcagggatgcggtgtgggcggtttttgagggtgtggtgggcgggttggag
agggctgtggcggtttgggagatggttaaaagtgggaggatctga
DBGET
integrated database retrieval system
