Nitrospira tepida: DNFV4_03025
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Entry
DNFV4_03025 CDS
T09383
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
nti
Nitrospira tepida
Pathway
nti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DNFV4_03025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nti03400
]
DNFV4_03025
DNA repair and recombination proteins [BR:
nti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
DNFV4_03025
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
DNFV4_03025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
CAI4032595
UniProt:
A0AA86T5P7
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All DBs
Position
NsDNF:complement(3088159..3088911)
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AA seq
250 aa
AA seq
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MPLVDTLAIALKSRKWGEADRIVTFFTLRVGKIRGVARGARRQKSQFGGGLEPFVLSRLS
LFEKPNDALYRIRHVDIEEPFLALRESLDRMAAAARLVNIVAAVTAEGDADARIFEALKA
GLQAVQLSRDPMMMAVLFQIRILGQTGFRPQIDLCAGCGRRLEQVSRHFSARSGGMVCAV
CLARQSAPCLLLSAGTLALLQQAVRLPIPLMSRLRAEGGVRAELEAAIDTFATVVAGKRL
PALDAWRPRV
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgccgcttgttgataccctggccatcgcgctcaagagtcgaaagtggggtgaggcggac
cgaatcgtcacgttctttacccttcgggtggggaaaattcgcggcgtggcccgcggagcc
cgccgtcaaaagagccagttcggaggcgggcttgagccgttcgtcttgtcccgcctgtcg
ctgttcgaaaaaccgaacgacgcgctgtatcgcattcggcacgtcgatatcgaagagccg
tttctcgccctgcgggagagcctcgatcggatggccgcggcggcgcgtctggtgaatatc
gtggcggcggtgacggcggaaggagacgcggatgcgagaattttcgaagcgctgaaggcc
gggcttcaagccgtccagttgagccgggatccgatgatgatggcggtcctctttcaaatc
cggatcctcgggcaaacaggatttcgcccccagatcgatctctgtgccggttgtggcagg
cggttggagcaagtcagccgccacttttccgcccggtcgggagggatggtctgcgcggtc
tgtctcgctcgtcaatcggccccgtgcctgctcctttctgcgggtacgctcgccttgctg
caacaggcggtcaggctgccgattccgctcatgtcccgcttgcgagcggaaggaggagtc
cgcgccgagttggaagccgcgatcgacacgtttgccaccgtggtcgcggggaaaagattg
ccggcgctcgatgcatggaggcctcgtgtgtga
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