Nitrospira tepida: DNFV4_03252
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Entry
DNFV4_03252 CDS
T09383
Name
(GenBank) Non-homologous end joining protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
nti
Nitrospira tepida
Pathway
nti03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
DNFV4_03252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nti03400
]
DNFV4_03252
DNA repair and recombination proteins [BR:
nti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
DNFV4_03252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
CAI4032822
UniProt:
A0AA86T729
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All DBs
Position
NsDNF:complement(3319586..3320461)
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AA seq
291 aa
AA seq
DB search
MPRSLWKGAISFGLVNIPVVLSSAENRNSFDLTMLDRRDMKPVGFKRYNKETGKDVPWED
IVKGYEYEKGRYVVLTEEDFRRANVEATQTVEIMSFVDAEAIPPTYFETPYYLVPDRRGE
KGYALLRETLKKTDKLALATVVIRTRQYVCALIPRGEVIVLNTLRYADELKSTKDLDVPS
ANLKTVGVTAREIEMAAKLVEEMTEDWNPEKFRDTYHEDLMKLIEKRIKAGQTEVISEPE
EEGATRAPAEVIDLMALLKKSVRAKEHKNGQRNRGKRAAGRHDRTVRRKSA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgctcactctggaaaggcgccatcagtttcggattggtcaacattccggtggtc
ctctcttccgccgagaaccgcaacagctttgacctcacgatgttggaccggcgggacatg
aagccggtcgggttcaagcgctataacaaggagacgggaaaggacgtgccatgggaggac
atcgtcaaaggctacgaatacgagaaagggcgctatgtggtcctcaccgaggaggacttt
cgacgcgcgaacgtggaggcgactcaaaccgtcgagatcatgagctttgtggacgccgaa
gcgattccgcccacctatttcgagacgccgtattatcttgtgcccgaccggcgtggggaa
aaggggtatgcgctcctccgagagacgttgaagaagaccgataaactcgccctcgcgacc
gtcgtcatccgcaccaggcaatatgtctgcgcgctgattccgcggggcgaggtcatcgtc
ctgaataccctgcgctatgccgacgagctgaaatccacgaaggacctcgatgtgccgtcc
gccaacctgaaaacggtcggcgtcaccgcgcgagaaatcgagatggcggccaagctggtg
gaggagatgacggaggactggaaccctgagaagttccgggacacgtaccatgaggacctc
atgaagttgatcgagaagcgcatcaaggccggacagacggaggtcatttcggagccggag
gaagaaggcgcaacgcgagcccccgcagaggtcatcgatctcatggcgctgctgaagaag
agcgtccgggccaaggaacacaagaacgggcagaggaatcggggcaagcgggcggccggc
cgccatgaccggacagtccggcgcaagagcgcctga
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integrated database retrieval system
