Nicotiana tomentosiformis: 104087948
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Entry
104087948 CDS
T05025
Name
(RefSeq) probable pectate lyase P18
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00040
Pentose and glucuronate interconversions
nto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
104087948
Enzymes [BR:
nto01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
104087948
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
104087948
NCBI-ProteinID:
XP_018623531
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MSSLLFIFVLFVTLLLTPLLVSSIQDPELVVQEVHRSINASLTRRNLGYLSCGTGNPIDD
CWRCDPNWEKNRQRLADCAIGFGKNAIGGRNGRIYVVTDSGNDDPVNPRPGTLRHAVIQD
EPLWIIFKRDMVIQLKQELVMNSFKTIDGRGTSVHISGGPCITIHYSTNIIIHGINIHDC
KQSGNGNIRDSPHHSGWWDVSDGDGISIFGGKNIWVDHCSLSNCHDGLIDAIHGSTAITI
SNNYFTHHDKVMLLGHSDSFTQDKGMQVTVAFNHFGEGLVQRMPRCRHGYFHVVNNDYTH
WEMYAIGGSAAPTINSQGNRFLAPNQKFNKEVTKHEDAPESEWRSWNWRSEGDLMLNGAY
FRQTGAGASSSTYARASSLSARPSTLVGSMTTSAGPLNCKISSRC
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagccttctcttcatatttgttctttttgtcacactacttctaaccccactactt
gtttcttcaatccaagatccagagcttgtggtacaagaagttcataggagcatcaatgct
tcattgacaaggaggaacttgggctatttgtcgtgtggaacaggaaatccgattgatgat
tgttggcgttgtgaccccaattgggagaaaaatcgccagcgtttagctgattgtgccatt
ggctttggaaagaatgctattggaggaagaaatggaagaatttacgtggtcactgactca
ggaaacgatgacccagtcaaccccaggcccggaacccttagacatgcggttatacaagat
gagcctttgtggatcattttcaaaagagacatggtcattcagctcaagcaagaacttgtc
atgaactctttcaagaccatagacggtcgaggcaccagcgttcacatatcaggtggtcct
tgcattacaatccattacagcacgaacattattatacacgggattaatatacacgactgc
aagcagagtggtaacggcaacattagggactcaccgcaccattccggatggtgggatgtt
tccgacggagacggcatttcaattttcggaggaaagaatatttgggtagatcattgctcc
ttgtcaaattgccacgacggtctaattgatgcaattcatggatccacagcaattaccatt
tctaacaactactttactcatcatgataaggtcatgttattggggcatagtgattctttt
acgcaggacaaaggcatgcaagttacagttgcctttaatcattttggtgaagggttggtg
cagagaatgccgaggtgtagacatggttatttccatgtggtgaacaatgactacacccac
tgggagatgtatgccattggtggtagtgctgcccctactattaatagtcaaggcaacagg
tttcttgctcccaatcagaaattcaacaaagaggtgacaaagcatgaggatgcaccagaa
agtgagtggagaagctggaactggaggtcagaaggtgacttgatgttaaatggtgcctat
ttcaggcaaacaggtgcaggtgcatcatcttctacttatgctagggcatcaagcttaagt
gcaaggccttctaccttggttggatccatgaccacaagcgccggtcctctcaactgcaaa
ataagttctcgctgctag
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