Nicotiana tomentosiformis: 104107079
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Entry
104107079 CDS
T05025
Name
(RefSeq) probable small nuclear ribonucleoprotein F isoform X1
KO
K11098
small nuclear ribonucleoprotein F
Organism
nto
Nicotiana tomentosiformis
Pathway
nto03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104107079
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nto03019
]
104107079
03041 Spliceosome [BR:
nto03041
]
104107079
03032 DNA replication proteins [BR:
nto03032
]
104107079
Messenger RNA biogenesis [BR:
nto03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
104107079
Spliceosome [BR:
nto03041
]
Complex A
U1 snRNP components
Sm proteins
104107079
U2 snRNP components
104107079
Complex B
U1 snRNP components
104107079
U4/U6.U5 tri-snRNP components
104107079
Complex C
U2 snRNP components
104107079
DNA replication proteins [BR:
nto03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
104107079
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
104107079
NCBI-ProteinID:
XP_009614072
LinkDB
All DBs
Position
Unknown
AA seq
88 aa
AA seq
DB search
MATVPVNPKPFLNNLTGKPVMVKLKWGMEYKGYLVSVDSYMNLQLANAEEYIDGQCTGSL
GEILIRCNNVLYLRGVPEDEELEDGDRD
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagtaccagttaaccccaagccttttttgaacaatttgactggaaagcctgtg
atggtaaagctaaagtggggaatggagtacaaagggtacctggtctcagtggattcatac
atgaacttgcagcttgcaaacgcagaagaatacattgatggacaatgcactggttctctt
ggagagatcctgattagatgtaataatgtcctctatcttcgtggtgtacctgaggatgaa
gaattggaagatggcgaccgcgactag
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