Nicotiana tomentosiformis: 104107465
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Entry
104107465 CDS
T05025
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
nto
Nicotiana tomentosiformis
Pathway
nto00450
Selenocompound metabolism
nto00970
Aminoacyl-tRNA biosynthesis
nto01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nto00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
104107465
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104107465
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
nto01007
]
104107465
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nto03016
]
104107465
Enzymes [BR:
nto01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
104107465
Amino acid related enzymes [BR:
nto01007
]
Aminoacyl-tRNA synthetase
Class I (U)
104107465
Transfer RNA biogenesis [BR:
nto03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
104107465
Prokaryotic type
Other AARSs
104107465
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
CoV_peptidase
Motif
Other DBs
NCBI-GeneID:
104107465
NCBI-ProteinID:
XP_009614577
LinkDB
All DBs
Position
Unknown
AA seq
812 aa
AA seq
DB search
MGDSSTAGNGDYLPPTTPKLPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARYC
RLRDYNAVYMCGTDEYGTATETKALEENSTPKQICDKYHAIHRDVYKWFDISFDQFGRTS
TPQQTEVCQAIFNKLWENNWLSENTMQQPYCDTCKKFLADRLVEGNCPTPGCNYDSARGD
QCEKCGKLLNPTELKDPRCKVCRNTPCIRDTDHLFLELPLLKDKLETYVNNMSVAGGWSQ
NAVHTTNAWLREGLKQRCITRDLKWGVPVPHEKYKEKVFYVWFDAPIGYVSITSCYTTEW
EKWWKNPENVELYQFMGKDNVPFHTVIFPSTLLGTGENWTLMKTISVTEYLNYEAGKFSK
SKGIGVFGNDAKDTNIPVEVWRYYLLTNRPEVSDTLFSWADLQAKLNSELLSNLGNFVNR
VLSFIAKDLVSGYGSIIPNPEGAESHPLTKALGEKVGNYVEQYIEAMEKVKLKQGLKIAM
SISGEGNGYLQESQFWKLYKEDKPSCSIVMSTAAGLVYLLACLLEPFIPSFSREVLKQLN
FPPETQVSLADEKGDVEKSKRPWHILPAGHKIGIPAPLFKELKDEEVEFYREKFAGSQAD
RNLKAEAEAKKITDQLNKAKISDANKKKERATKPSVAKSKGSASVEAEISISRLDIRVGL
ITRAQKHPDADSLYVEEIDVGEAQPRTVVSGLVNYIPLEEMQNRKVCVLCNLKPASMRGI
KSQAMVLAASSSDHTRVELVEPPKDAAIGERVTFPGFDGTPDDVLNPKKKVWETLLVDLH
SNKELVACYKDLPFTTSAGVCKVASISEGSIR
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgggcgattcttccaccgccggcaacggcgactatctgccgccgacaactcccaaactt
ccgataccgggaaaacggaacatcctcatcacaagcgctttgccatacgtcaacaacgtt
cctcacctcggaaacatcatcggaagtgtgttgagtgcggacgtgttcgcgagatactgt
aggcttcgggattacaatgcagtatacatgtgtggtactgatgaatatggcacggctact
gagactaaagctttggaagaaaattctactcccaagcaaatttgtgacaaataccatgca
attcatagagatgtttataaatggtttgatataagcttcgatcaatttggacgcacgtct
actccacaacagacggaagtttgtcaggcgatctttaacaagctttgggagaataattgg
ctctctgagaacactatgcagcagccgtactgtgacacatgcaaaaagtttttggcggac
cggcttgtagagggtaactgcccaacaccaggttgcaactatgattctgcacgtggagat
caatgtgagaagtgtgggaaactcttaaatcccactgaactgaaggatccaagatgcaag
gtctgtcgtaacaccccttgcatccgagatacagaccatttgttccttgagctccctttg
ctaaaggataaattagaaacttacgtcaacaacatgtcagtggctggaggatggagtcag
aatgctgtccacacaacaaatgcctggcttagagaaggactaaagcaaaggtgtataact
agagatttgaaatggggggttccagttccacatgaaaaatacaaggagaaggttttctac
gtgtggttcgacgctcctattggatatgtatcaataacatcatgctatacaacagagtgg
gagaagtggtggaagaatccagagaatgtggagctctatcagtttatgggcaaagataat
gtgccttttcacactgtgattttcccatctacgctacttggaactggtgaaaactggact
cttatgaagactatcagtgtaacagaatacttgaactatgaagcaggcaagttctcaaag
agtaagggcataggagtattcggtaatgatgcaaaagatacaaacattcctgtagaagta
tggagatattacttgctgacaaacaggccagaggtgtcggacactttgtttagctgggca
gatttacaagcaaagttaaacagcgagttgctaagcaacttaggcaatttcgtcaataga
gtcctaagtttcattgcaaaagatctggtttcaggttatggttccataattcccaatcct
gaaggagctgaatcacaccctttaactaaggccttgggtgaaaaagttggaaattatgtg
gagcaatatatagaagctatggagaaggttaaattgaagcaaggcttgaagattgctatg
tctatttctggagaaggaaacggttatttgcaagagagccagttctggaaactttacaag
gaagataagccatcgtgttccatagtgatgagcactgctgctggcctagtgtatcttctt
gcatgtcttttagagccatttataccatccttttcacgtgaggtgcttaagcagctgaac
tttcctcctgaaacacaagtttcactggctgatgaaaaaggtgacgttgaaaaaagcaaa
cgaccatggcatattctacctgcaggacacaaaattggaataccagcaccattgttcaag
gagctgaaagatgaagaagttgaattttacagagagaagtttgccggaagtcaagcagat
aggaatttgaaggcagaagccgaggcaaagaagatcactgatcaattgaacaaagcaaaa
atctctgatgctaataagaagaaagagcgtgctacaaaaccttctgtagccaaatctaag
gggtcagcctctgttgaagcagaaatttcgattagcagactcgatattcgtgttggtctc
attacaagagcacagaaacatcccgatgctgattcattgtatgttgaagagattgatgtc
ggtgaagctcagcccagaactgttgttagtggccttgtaaattatattcctctggaggag
atgcagaatcggaaggtttgtgttctatgcaacctaaaaccagcaagcatgaggggcata
aaatcccaggcaatggttcttgctgcttctagtagtgatcacactagggttgaactagtt
gagccacctaaagatgctgccattggtgaaagagtaactttccccgggtttgatggcact
cccgatgatgtcttgaaccctaagaagaaggtttgggaaactcttctggtggacctgcac
tcaaataaggagttggtcgcttgctataaagatttgccattcaccacttcagctggtgtt
tgcaaagttgcatccatttctgaaggatcaattaggtaa
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