KEGG   Niallia taxi: NQZ71_10025
Entry
NQZ71_10025       CDS       T09453                                 
Symbol
ligD
Name
(GenBank) DNA ligase D
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
ntx  Niallia taxi
Pathway
ntx03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ntx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    NQZ71_10025 (ligD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ntx03400]
    NQZ71_10025 (ligD)
Enzymes [BR:ntx01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     NQZ71_10025 (ligD)
DNA repair and recombination proteins [BR:ntx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     NQZ71_10025 (ligD)
SSDB
Motif
Pfam: LigD_Prim-Pol DNA_primase_S
Other DBs
NCBI-ProteinID: WOD61176
LinkDB
Position
complement(2019189..2020397)
AA seq 402 aa
MKYTASFTITEYNLMDKLFSVGVADNGIIKNVGQFSEGMTKEESTALLSIVQKNARTVGK
VILVEPGICVELEFSSFEDEKIIQPVFVQFLFQKSWQECTYEQLLQNIGLDKLTITNPDK
PLFPDNNVRKIDFINYLTLAEEKILPFLQNRLLTVIRFPHGLFGESFYQKQCPDYAPAFV
ETSWKEDINYIICNNKQTLLWLGNQLAFEFHIPFETVLSDSMPSEIVFDLDPPSRDHFFM
AIKAAQILKQVLDGLKLISFIKISGNKGIQVYIPLPEKTYTYDEARIFTEFIANYMITIE
PELFTIERLKKNRHNRLYIDYIQHSEGKTIIAPYSVRGNEGGYVACPIFWDELTNNLSPK
AFTMESVSERLKNREDPFQSYFATKEKQSLKEVLHFIQSNHT
NT seq 1209 nt   +upstreamnt  +downstreamnt
atgaaatatactgcttcctttacgattacagagtataaccttatggataagctgttttcg
gtaggtgttgcggataatggcatcatcaaaaatgttggacagtttagtgaaggcatgaca
aaagaagaaagtactgccttactaagcattgtgcaaaaaaatgcacggacagtgggtaaa
gtgatcttggttgaaccaggtatatgtgttgagcttgaattctcttcgtttgaagacgaa
aaaattattcaacctgtatttgtacaatttcttttccaaaaaagctggcaggagtgcact
tatgaacagctactgcaaaacatcggacttgataaactgactatcaccaatccagataaa
ccattatttcctgataacaatgtacgcaaaatagatttcatcaactatctaacattggca
gaagagaaaatactgccttttttacaaaatcggctactgacagttatccgtttcccgcat
ggattgttcggtgaatctttttatcaaaagcagtgtcctgattatgcaccagcatttgtt
gaaacaagctggaaggaagatattaattatattatctgcaacaataaacaaacactgctt
tggctgggcaatcagcttgcattcgagtttcacataccatttgaaaccgtcctgtctgac
agtatgccttcagaaattgtgtttgatttggacccgccatcacgagatcatttctttatg
gcaattaaagctgcacaaatactcaagcaggttctcgatggattaaagcttatttctttt
ataaaaatatctggaaataaaggcattcaagtatatattccacttccagaaaaaacttac
acgtatgatgaagcaagaattttcactgaatttattgcaaactatatgataacaatcgaa
ccagaattatttacaattgagcgcttgaaaaaaaatcgccataaccggctttacatcgat
tatatccagcatagcgaaggaaaaacgatcattgctccctattctgttagaggaaatgaa
ggtggatatgtcgcttgcccgatattttgggatgaactcacaaataatttatcgccaaaa
gcctttacaatggagtctgtgtcagaacgactgaaaaacagggaggatcccttccaatct
tattttgcaacgaaggaaaagcaatcattaaaagaagtccttcattttatccagtcaaac
catacatga

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