KEGG   Nonlabens ulvanivorans: R1T42_13295
Entry
R1T42_13295       CDS       T09493                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
nul  Nonlabens ulvanivorans
Brite
KEGG Orthology (KO) [BR:nul00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nul03400]
    R1T42_13295
Enzymes [BR:nul01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     R1T42_13295
    5.6.2.6  RNA 3'-5' helicase
     R1T42_13295
DNA repair and recombination proteins [BR:nul03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    R1T42_13295
SSDB
Motif
Pfam: Lhr_WH DEAD_assoc DEAD Helicase_C ResIII Terminase_6N
Other DBs
NCBI-ProteinID: WOI22633
LinkDB
Position
complement(2944890..2947346)
AA seq 818 aa
MNKTQLHKIAEDYFDQQGWGAFPFQKKTWDAFLAGKHGLLNAPTGSGKTYALWVAVVLDY
IKKHPDYKKKPKKGLKAIWITPLRSLSQEIAQASQRFVDGIDLPFTVGIRSGDTSTKERT
AQRKSMPDLLITTPESLHLLLGSKDHAKIFKDCQAIIIDEWHELLGTKRGVQMELGISRL
LGLSKNIRVWGISATIGNLEQAREVLLGVDENRFRESVLIKANIKKDIKVQSIIPASMDK
FPWRGHLGLHLLEDVVKIINSSRSTLIFTNTRAQCELWFQSLMTKHPEFAGEVAMHHGSI
NKETRIWVENAIRNESLKACVCTSSLDLGVDFAPVETIIQVGGPKGVARFLQRAGRSGHR
PGETSVIHFLPTHALELIEASALQKTVATQAVEDRLPYILCYDVLIQYLCTLAVSGGFYP
DEIFPEVKNTFCFAAITDEEWKWCLDFIVYGSSSLQSYDEYKKVKIDDTGRYLIDDRKIA
MRHRLQMGTIVGATLVTVKYQSGGYIGSVEEYFISKMDRGDVFIFAGRTLEFIRLKGMIA
HVKNTTKKTNTVSSWQGSRLPLSAQLGELLRDEMENFQTGKKRTPEVKALKEIIQRQQLE
SIVPQKSEFLIETFKTREGYHAVFYPFEGRFVHEAMAGIIAYRVSLLKPITFSLAFNDYG
FEILSDQAFDMQEILDNDLLTPEMLSQDLQASMNATEMARRQFRDIAVISGLVFTGYPNK
AVKTKHLQNSSQLLFEVFRDNEPDNLLFRQAYTETFEQAIQEYRLREALERIQEQEIIWK
ACEKPTPFSFPIITDRLREKLSSEKLADRIKRMQLKWE
NT seq 2457 nt   +upstreamnt  +downstreamnt
atgaataaaacccaacttcataaaatagctgaggattacttcgaccagcaaggttgggga
gcttttccatttcaaaaaaagacttgggatgccttcttagctggtaagcatggattatta
aacgcacctactggtagtggaaaaacctatgcgctttgggttgccgtagttctagattac
ataaaaaagcatcccgattataagaagaaacctaaaaaagggctcaaagcgatatggatt
actccgttgcggtcgttaagtcaggaaatcgcacaggcatcacaacgatttgtagatggt
atcgatttaccttttactgttggaatacgtagtggtgatacgtctacaaaagaacgtaca
gctcaacgtaaatctatgcccgacttactcattaccacaccagaaagtttacatctttta
ctgggctcaaaagaccacgcaaagatttttaaagattgtcaagctatcattattgatgag
tggcacgaacttttgggaactaaacgtggtgttcaaatggaacttggtatttctcgactt
ctaggcttgagtaaaaatatcagagtttggggaattagtgctacgattggtaatctagag
caagctcgtgaagtgttactaggtgttgatgaaaaccgctttcgcgaaagcgtattaatt
aaagccaacatcaaaaaagacatcaaagtacaatccattattccggcaagtatggacaaa
tttccgtggcgtggtcacctaggattgcatttacttgaagatgtcgttaaaatcatcaat
tctagtcgttccacactgatttttacaaatacacgagcgcagtgtgagttatggttccaa
tccttaatgacaaaacatcctgagtttgctggtgaagtagcaatgcatcacggatcgatt
aataaagaaacgcgcatatgggtagaaaacgcgattagaaacgaaagcttaaaagcttgt
gtttgtacctcatcgctggatttaggtgttgatttcgcacctgtagaaaccatcattcaa
gtaggcggacctaaaggtgtggcacgttttctacaacgtgcaggacgttctggtcacaga
cctggagagaccagtgtgattcattttttacctacgcatgcgttagaactcatagaagct
agtgcgttacaaaagactgtcgcaacacaagccgtagaggatcgactgccttatatttta
tgttatgacgtgttaattcagtacctgtgcacactcgcagtgtctggtggcttttatccc
gatgagatttttcctgaggtaaaaaacacattctgctttgcagcgattacagatgaagaa
tggaaatggtgtctggattttatagtttacggtagttcctctctacaatcttatgatgaa
tataaaaaagtaaaaattgatgataccggtcggtatttaattgatgatagaaagatagcc
atgcgtcatcgcttgcaaatgggaactattgtaggagcaacactggtaactgtaaaatat
caatctggtggttatataggtagtgtagaagaatattttataagtaaaatggatcgtggt
gatgtatttatttttgctggtcgcacgctagaatttattcgtttaaaagggatgattgct
catgtcaaaaacacgaccaaaaaaactaatacggtttctagttggcaaggtagtcgcctg
ccgttaagtgcacaattaggagagttactacgtgacgaaatggaaaactttcaaacgggc
aaaaaacgcacgccagaagtaaaagcacttaaagaaattatacagcgacagcaattagaa
agcatcgtaccgcaaaagagtgagtttttaatcgagacttttaaaactcgtgaaggttat
catgccgttttttatccttttgaaggacgttttgtacacgaggctatggcaggaattatt
gcttatcgagtcagcttattaaaacctatcacattctcactggcttttaatgattatgga
tttgaaatattaagtgaccaagcctttgacatgcaggagattctggacaacgatttactc
acaccagagatgttatcacaagacttacaggctagcatgaatgccacagaaatggctcgt
aggcagtttagagatattgccgtcatatctggattagtattcacgggttatcctaataaa
gcggtaaaaacaaaacacctgcaaaatagcagtcagctactatttgaagtattccgtgat
aatgaacctgataatttattatttagacaagcatataccgagacctttgaacaagccatc
caagaataccgcttgcgtgaggcactagaacgcatccaggaacaagaaatcatctggaaa
gcctgtgaaaaacctacaccattctcttttccgatcatcacagaccgcttacgcgaaaaa
ttaagcagtgaaaagctagccgatagaatcaagcggatgcagttgaaatgggaataa

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