Nematostella vectensis (starlet sea anemone): 5511240
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Entry
5511240 CDS
T01037
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 4 isoform X1
KO
K11642
chromodomain-helicase-DNA-binding protein 3 [EC:5.6.2.-]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
5511240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
nve03036
]
5511240
Chromosome and associated proteins [BR:
nve03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
5511240
Chromatin remodeling factors
NuRD complex
5511240
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
DUF1087
PHD
Chromo
HDA2-3
ResIII
CHDNT
AAA_22
DEAD
PHD_2
Zn_ribbon_SprT
zf-TFIIB
Motif
Other DBs
NCBI-GeneID:
5511240
NCBI-ProteinID:
XP_032236391
LinkDB
All DBs
Position
Unknown
AA seq
2208 aa
AA seq
DB search
MASSSKKKETQAANDSNIGDDSGEKQTKKKKALENSEALATGSSKKSNGNKKRKRENDKE
DEDTTVGGTACLSEDEQPSKIAKAENRDQEPAEDKPIVGQEGPSQTKAQAVAMEMNLELP
DQQLSKEDEEGVTYVKFTKAMRPAVASANPGVAHTRINALLGAMWQDFKTAQGPSSPASR
SSSKKSSAKKKKAQSKNKKADSDGYLSPAYSDFDEFDIESDDSGPVTTKSRPKIKLPFLS
RLKGKMRDKKSKGDDDSDKGSEASTTSSRSKKTKVKTRGKRKNDDRDDDESDNSIREIRV
SKSRKKVVRKPSIKIKDTTIKKDKHSKRRHRTCDDDEVMGVDEHQDYCEACDEGGDLLLC
DTCTLSYHLGCLNPALDEPPEGRWSCPVCEVEMTSSSSEDIHSDYCRVCKDGGQLLCCDK
CPMAYHLKCLIPPMMRVPTGEWKCPRCQSEPLKGKVERILHWRWVTLPIPPDYQALTPEG
EEQKDKTVDTYTTREFFVKWREKSYWHCSWITELQIEIQHPEMFRAFSRKNDMDEPPPLS
DDDDEDSIEDGQHPSPTAKSKAKEQDENNLEARFYRYGVNPEWLQINRIMNHRVLKDGSE
EFFVKWRDVPYSQSTWESPDDPINHQISDFKEYIKKYYAHREGYDKKIKAKKGKNKKSKK
TLPTGDTPEEESKPDIEPAQPIPTPQVNCKERYEKQPAYLDETGGKLHEYQREGLNWLRF
SWAQGTNTILADEMGLGKTIQTISFLYSLMKEGHSQGPFLVSAPLSTLVNWEREFEFWAP
DMYVVTYAGDKESRATIRNFDFSFDEDAFKSGLKAYKLKKDSPVKFHVLLTSYELVSIDS
ASLQSIDWAMLVVDEAHRLKNNQSKFFRTLSDYNIGYKLLLTGTPLQNNLEELWNLLFFL
DPVEFNNKNNFLTEFDNVAKEDQIKKLHDILGPHMLRRLKADVLKGIPSKSELIVRVELS
PMQKKYYKWILTRNFEALNTKGAQQVSLLNVMMELKKCCNHPYLFHAAALEAKRTQSGGY
EPNSLTEASGKLMLLVKMLKKLREQGHRVLIFSQMTRMLDLLEDFLEGHGYKYERIDGSV
NGAARQEAIDRFNAPTSQAFCFLLSTRAGGLGINLATADTVFIYDSDWNPHNDIQAFSRA
HRIGQNNKVMIYRFVTRSSVEERITQVAKKKMMLTHLVVRPGLGSNKATIMSKSELDDIL
KFGTSELFKDDDTKDGESGDSVVFHYDDKAITSLLDRDQQVMEDEVKDEPMLANEYLASF
KVASYIVKQKEEDVEVLKQAPETTDQDYWEKLLRHHYEQFREDEARELGKGKRIRKQVNY
VDTGIEDQDDSAIWSKDLSDFEGDDLSGLEDEDESDEEFNQKTEGQRRGRRPPREDTMPP
MLARVQGNLEVYGFSLRQRKAFLNAVMRYGLPPQKDITKSQWFVRDLRGKGEKAVQAYSS
MFLRHLCEPGYDGGSQFSDGVPREGLHRQQVLTRIGVMSLIRKKVEEFAPINGWDCSKLE
STPLEPRGPSRASSGVSTPVATPEPKKEEPEEKPSPSPKTANKSESEKGKGESEKDKGES
EKDKGESEKDKGESEKDKGESEKDKGESEKEKCQSEKEKCESEKEKCESEKEKCESEKKV
EESKDENPEEKIEEKKDDTASEKKESSEEKMEVDGEEQKVEKSPESVDKTEGHERTDVED
DEKKADDSNEDIGKKDESRDQAEDAKKEESKTEEMETDAESKQEETGNATVDSTKPTAEA
KDEKTDDTKETKEGLKGDKSDPVTTPKAEEKSPKAEALRKPEKKFMFNIADGGFTELHTL
WEVEEKRKCDDIWWRKHDYWLLAGVAYHGYARWQDIANHHMFAVINEPFKNVSLEYKNRF
IARRFKLLEQALIIEEQLKRADKLNLKQDAQHPAMALNARFAELECLAESHQHLSKESLS
GNKPANAVLHKVLNQLEELLADMKGDVNRLPSTLVRMQTVANRLGMSERSILSQLTKGDG
KHDVATLPLPAGAATVRPNIQPKPTYPPAAGGATISVKPPVPTTLMLPSFSNTAMRPVNP
TPQILPKATPSVLSPTPTPYVSTLITRPGVPASAATQPSPQSSRPPASQSPAQTSATPVI
NSVFSLSPAGSPSSTPRSGTPPSGTTSLAKPTLSKKASALVDNQLSSIIRNKASAMGLIR
PSTSPSLQSPGDSGVSPASSPLAATATLEPGQKPTEGGEKSPDIICLD
NT seq
6627 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttcttcaaaaaagaaagaaacacaggcagcgaatgacagtaacatcggggat
gattccggtgagaagcagaccaagaaaaagaaggcactagaaaactctgaagctttggct
acagggtcttcaaagaagtcaaatggaaacaagaaaagaaagcgtgaaaatgacaaagag
gatgaagacaccacagtgggcggcactgcttgtctttcagaagatgaacagccttctaag
atagcaaaggcagagaatagagaccaagaacctgcagaggataaaccaatagtaggccag
gaggggccttctcagaccaaagcacaggctgttgctatggaaatgaatctagagctaccg
gatcaacaattgagtaaggaagatgaggaaggtgttacttatgtaaagttcaccaaggcc
atgagaccagcagttgcaagtgcaaacccaggtgttgcacacaccaggatcaatgctctt
ctaggagccatgtggcaggacttcaagactgcccagggacctagtagccccgcatcacga
tccagttctaagaaatcatcagccaagaaaaagaaagcccagagcaagaacaagaaagct
gactcagatggctacctatctcctgcatactctgattttgatgagtttgacattgaaagt
gatgatagtggccctgttactacaaaatctcggcctaaaatcaagcttcccttcctcagc
aggttgaagggaaaaatgcgagataagaaaagcaaaggtgatgatgatagtgataaaggc
agtgaggcaagtaccacaagtagccgaagcaaaaagaccaaagtcaagaccagaggcaag
agaaagaatgatgacagagatgatgatgagagtgataatagcatcagagaaatacgagtc
agcaagtcccgtaagaaggttgtacggaagccttcaatcaagatcaaggatactacgata
aagaaagacaagcacagtaagaggcgacacaggacatgtgatgatgatgaagtgatggga
gtggatgagcaccaagactactgtgaggcatgtgatgaggggggagacctcttgctctgt
gacacctgtaccctttcataccatctgggatgcttgaatcctgccttggatgagccacct
gagggacgctggagctgtcctgtttgtgaggtggagatgacaagcagctcaagtgaagac
atccacagcgactactgccgtgtgtgtaaggatggtggtcagctcttgtgctgtgacaag
tgtcccatggcgtatcatctcaagtgccttattccacccatgatgagagtacccactggg
gaatggaaatgcccaaggtgtcagagtgaaccattaaagggcaaagttgagaggatattg
cactggagatgggtcactcttcccatcccaccagattaccaagctcttactccagaaggg
gaagaacaaaaggacaaaactgtagatacttacaccacccgggagttctttgtgaagtgg
agagaaaaatcctactggcactgctcatggatcactgagcttcagattgagatccaacat
ccagaaatgttcagggcattctcacgtaaaaatgacatggatgaacccccaccactaagt
gatgatgatgatgaagacagcattgaagacggccagcaccccagcccaactgccaagtct
aaagcaaaagagcaggatgagaataatttggaggcaaggttctaccgatatggggtcaat
cctgagtggctacaaattaacagaatcatgaaccacagagtattgaaggatggctctgag
gaattctttgtcaagtggcgagatgttccttacagtcagagtacatgggagagccctgat
gaccccatcaaccaccagatcagtgactttaaagagtatatcaagaaatattacgctcat
agggaaggatatgacaagaagattaaagcaaagaaaggaaagaacaaaaaatcaaaaaag
actcttcccactggagatacacctgaggaagaatctaaaccagatattgaacctgctcaa
ccgatccctactcctcaagtcaattgcaaggagaggtacgagaaacaacctgcctatctt
gacgagacaggtgggaaacttcatgaatatcagagggagggcttgaattggctgcgcttc
tcttgggcccaagggacaaacaccatcttggctgatgagatgggtcttggcaagaccatc
caaacaatcagcttcctgtactctctcatgaaagagggtcattcccaagggccgttttta
gtgagtgctccactctcaacccttgtcaactgggagcgtgagtttgagttctgggctcca
gacatgtatgtggttacctatgctggcgacaaagaaagtcgagctaccattagaaacttt
gacttctcatttgacgaagatgctttcaaaagtggcctgaaggcttataaactgaagaaa
gacagcccagtcaagttccatgtcctgctcacttcctatgagcttgtgagtatcgactct
gccagtcttcagtccattgactgggcgatgctggtagtggatgaagctcacagactgaag
aataatcaatcaaagtttttccgcacacttagtgactacaacataggctacaaactattg
ctaacaggaaccccactacagaacaacttggaggagctatggaatctattgtttttcctt
gacccagttgagttcaacaacaagaataactttcttactgagtttgataatgttgccaaa
gaagaccagatcaaaaagctccatgacatccttggcccacacatgttgcgaagactgaaa
gctgatgtcctcaaggggattccatccaagagtgaactcatcgtcagagtagagctcagt
ccaatgcaaaagaagtactacaagtggattcttactcgcaactttgaagcactgaatacc
aaaggagctcaacaggtttcactgctgaacgtcatgatggagttgaaaaaatgttgtaat
cacccatatcttttccatgctgctgcattggaagcaaaacgcacacaaagtggtggctac
gagcctaacagcttgaccgaagcaagcggcaagctaatgctgcttgtgaaaatgttaaaa
aagctgcgagagcagggacatcgtgtgctgatcttctcccagatgacacgtatgttagac
ttgctggaagacttcctggagggtcatgggtacaaatatgagcggattgatgggtcagtc
aatggagcagccagacaagaagccattgatcgcttcaatgcccccacatctcaggctttc
tgtttccttttgtctactcgtgctggtggtctaggcattaatcttgcaaccgcagacacg
gttttcatctatgactccgactggaacccacacaatgacatccaagcattcagccgtgct
cacaggataggccaaaacaacaaggttatgatttaccgttttgtcacaagatcatcagtt
gaagagcgcatcacccaggtggcaaagaagaagatgatgcttacccatcttgtggtgcgg
ccaggcttgggctccaacaaggccactatcatgtccaagagtgaactggatgacatcctc
aagtttggtacttcagagctcttcaaggatgacgacaccaaggatggagaatcaggtgat
agtgtagtgttccactatgatgacaaggcgattaccagcttgttggaccgggatcagcaa
gtcatggaggatgaagtcaaggacgagcctatgctggccaacgagtatcttgcatcattt
aaggttgctagttacattgtcaaacagaaggaggaagacgtggaagtcctgaagcaagcc
ccagagaccacagaccaggactactgggagaagctgttgcgccatcactacgaacagttc
cgagaggatgaagcccgtgaacttggcaaagggaagagaatccgcaagcaggttaactat
gtggatactggcattgaggatcaagacgactctgcgatctggagtaaagacttgtctgac
tttgaaggggacgacctcagcggccttgaagatgaagacgagtcagatgaagagttcaac
cagaaaactgaaggacagagacgaggtaggcgtcctccaagggaagacacgatgcccccc
atgctggcaagagtacaggggaatttagaggtgtatggcttcagtctgcgccagcggaag
gcattcttgaatgcagtaatgcgctatgggctaccacctcaaaaagacatcaccaagtca
cagtggtttgtccgtgacttgcgtggcaagggagaaaaggctgtgcaggcttactcgtcc
atgttcttgcgccacttgtgtgagcctggctatgatggcggcagccagttcagtgatgga
gtaccacgtgaaggactccaccgccagcaggtgctcacgcgtataggcgtaatgagcctc
atcagaaaaaaggtggaagagtttgcccccatcaatgggtgggactgtagcaagctagag
agcactccccttgaaccacgcggacccagcagggcgtcatcaggcgtgtctactccagtc
gctactcctgaacccaagaaagaggaacctgaggagaaaccaagtccatcccccaagaca
gcaaataaaagcgaatcagaaaaagggaaaggcgaatcagagaaggacaaaggtgaatca
gagaaggacaaaggcgaatcagagaaggacaaaggcgaatcagagaaggacaaaggcgaa
tcagagaaggacaaaggcgaatcagagaaggaaaagtgtcagtcagagaaggaaaagtgt
gagtcagagaaggaaaagtgtgagtcagagaaggaaaagtgtgagtcagaaaagaaggtc
gaggagagtaaagatgaaaatcctgaagagaaaatagaggagaaaaaggacgataccgct
agtgagaaaaaagaaagctctgaggagaaaatggaggtcgatggcgaagagcagaaggtg
gagaaatcaccagaaagtgtggataaaactgaaggccacgagaggactgatgtggaagat
gatgaaaagaaagcagacgattcaaacgaagacattgggaagaaagacgagagcagagat
caagcggaagatgcaaaaaaagaagaaagtaaaacagaggagatggagacggatgccgaa
tcgaaacaagaggagactggtaacgccaccgtagactccactaagccaaccgccgaggca
aaagacgagaaaacagatgataccaaagagactaaagagggattaaaaggggataaatct
gatcctgtcaccacgcccaaagccgaggagaaatcgccaaaggctgaggctcttcgcaag
cccgagaagaagttcatgttcaatattgctgatggcggcttcacggagttgcacacgttg
tgggaggtggaagagaaacgcaagtgtgatgatatctggtggcgcaagcacgactactgg
ctcctagctggagttgcttaccatggctatgcgagatggcaggatatcgccaaccatcac
atgttcgctgttatcaacgagccctttaagaatgtgtcattagaatacaagaacaggttc
atcgccaggcgttttaagttactcgagcaggcgttaatcattgaagagcaactcaagcga
gcggataaactaaacttgaagcaggacgcccagcacccggccatggcacttaacgctagg
tttgcagagcttgagtgtctagcagaaagtcaccagcacttatccaaggaatccctgagc
ggaaacaagccggcgaacgctgtccttcacaaagttttgaaccagctggaggagctgctg
gcggacatgaaaggtgacgtcaaccgtctaccctcgaccctagtacgaatgcaaacggta
gccaaccgcttggggatgtccgagcggagcattctgagccagctcactaagggtgacggt
aaacatgacgtcgctactcttccgttgcctgcaggagctgcaactgtacgtcccaacatc
cagcccaagcccacttacccgcctgctgccggcggcgcaaccatctcagtcaagccccct
gtacctacaacgttgatgcttccgagcttttccaacactgcaatgcgccctgtgaacccc
accccacagattttacccaaggccacgccctctgttctgtctccgacaccgacgccttac
gtgtcaactttgatcacgcgacctggggttcctgcctcggccgcgacacagccatcacca
cagagctcgcgcccaccggcctctcagtcccctgcacagacatcagcgactcctgtcatc
aacagcgtgttcagccttagccccgccggaagtccttcttccactcctcggagcgggact
cccccctcagggactacatccttagccaagcctacactaagtaagaaagccagcgcgctt
gtggacaaccagttatcctctattatacgtaacaaggcgtcggcgatggggctgattcgc
ccatctacgagcccctccctacagtcccctggagactccggggtgtcaccagcgtcctca
cccttagctgcgaccgctaccttggaacctggtcagaagccgactgaaggcggcgagaag
tctcctgacattatttgtctagattag
DBGET
integrated database retrieval system
