Nematostella vectensis (starlet sea anemone): 5514841
Help
Entry
5514841 CDS
T01037
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
5514841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nve03041
]
5514841
Enzymes [BR:
nve01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
5514841
Spliceosome [BR:
nve03041
]
Complex A
U2 snRNP components
U2 related factors
5514841
Complex B
5514841
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
5514841
NCBI-ProteinID:
XP_032240375
LinkDB
All DBs
Position
Unknown
AA seq
1064 aa
AA seq
DB search
MARDRSKERRRSRERSRRSKSKERKRSRSKSIDRAKRKRSRSREKERDRTKDRERKSRRD
KERDKSRKRARSSSSSSGTSRSRSRSKDRKSRRRSRSRSLEKKKINRSKEKRRKSRSRSK
DRSDSSRSRSRSRERESKKSKSRKKQEDADESGKDKESRSSKSVKEETSQADVSKIADAG
DLESEMQKRRERVEAWRARKKKEMQLQEAAKKIQEIKKSKVWSLEDDDEDDEPDVAMNDE
DDNDAESNNPQTEEEEEEPDVDPLDAFMATVNKEVKKVNTLDKKKLGKGKATVITHVVVK
KPEVTEKSEKKGELMEGDIDAMEYSSEEEKEEEDLESTYAGYKTKKKKELQPVDHKTVVY
QPFRKDFYVEVPELAKMTPEETDEFRLSLENIHVRGKNAPKPVKTWAQTGVQLKILDVLK
KNSYEKPTPIQAQAIPVIMSGRDMIGIAKTGSGKTLAFLIPMFRHIKDQPPLEREEGPIA
IVMTPTRELAIQIHRECKKFCKPNNLRCVCVYGGTGISEQIAELKRGAEIIVCTPGRMID
MLTANNGRVTNCQRCTYLVLDEADRMFDMGFEPQVMRIIDCIRPDRQTVMFSATFPRQME
ALARKILDKPIEIQVGGRSVVCSDVEQNVVVIEEDDKFLKLLELLGLYQEQGSVLVFVEK
QDSADSLFKDLLKRSYPCLSLHGGMDQFDRDSTIADFKNGVTKLMIATSVAARGLDVKHL
NLVVNYDCPNHYEDYVHRVGRTGRAGNKGTAYTFLTPEQGRFAIDVIKALEMAENPVPED
VRNLANTYIETRKAEGKNIVKNSGFSGKGFKFNDEEKAKVSEAKKIQKWALGLQDSDDEA
EAEEKAVEEIDKRLDAVFSKKPHVKKVVPQVGEPAVKREGEQQAKFNLASSIAAKINQKI
SAGTNNLDPTQQAASQIIKGGTVTALTGLDLAKQLAQKVHTKLNYEGPQEEVKEKEEEKQ
EAERYEDEVEINEFPQTARWKITSKETIMTITEYSECAVTVRGTYFPPGKEPKEGERKIY
LYIEGPSERAIQLAKSEIKRIVKEELVRLGTYRGPQPTGRYKVL
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atggcacgagacagaagcaaagaaaggcgcaggagtagagaaaggagtcgtaggtcaaag
agtaaagaaagaaaaagatctagaagtaaaagcattgatagagctaagcgtaaaagatca
aggagtagagaaaaagaaagagacagaaccaaagacagagaaagaaagagcagacgagat
aaggagagggacaaaagtcgcaaacgtgctcgaagcagctcctctagtagtggaaccagc
agaagtaggagtcgcagtaaggaccgaaaaagtaggagacgatctcgcagcagaagtctt
gagaaaaagaaaattaatcggagtaaggagaaacgaagaaaatcccgaagtagatctaaa
gacaggtctgactcatctcggtcaagatcaagaagcagggagagagagagtaaaaaatcg
aaatccaggaaaaagcaagaggatgctgatgaatcaggaaaggacaaggagagtagatcc
agcaagtcagtgaaagaggagacctctcaggcagatgtttctaagatcgcagatgcagga
gatctagaaagtgaaatgcaaaagagaagagaaagagttgaggcctggagagcgagaaag
aaaaaagaaatgcagctacaagaagctgctaaaaaaattcaagaaatcaagaagtctaaa
gtttggagtttggaagatgatgatgaagatgatgaaccagatgttgctatgaatgatgag
gatgataatgatgcagagagcaacaacccacagacagaggaagaagaggaggaacctgat
gttgacccacttgatgcatttatggccacagtcaacaaagaagtgaagaaagtgaacact
ctagacaagaaaaagcttgggaaaggaaaagctactgtaattactcatgtagtcgtcaaa
aagccagaggtgactgagaaatctgagaagaaaggggaattgatggaaggagacattgat
gctatggagtactcgtcagaggaagaaaaggaggaagaagaccttgaatcaacttatgca
ggatataaaaccaaaaagaaaaaggaattacaacctgttgaccacaagacagttgtttat
cagccattcagaaaagatttctatgtggaagtcccagagcttgcaaagatgaccccagaa
gaaactgatgagtttcggcttagtctggagaacatccatgttcgagggaaaaatgcaccc
aaacccgtcaagacttgggctcagactggggtgcagctcaagatacttgatgtcttaaaa
aagaatagctatgagaaaccaacgcccatccaggcacaggcaattccagtcatcatgtcc
ggccgagatatgattggtattgccaagactggcagtggaaaaacattggcatttctcatc
ccaatgttcaggcatatcaaggaccagcccccattagagcgagaagaagggccaattgca
attgtgatgacacccactagagagttagcaatccagatccaccgtgagtgcaagaagttc
tgcaagcctaacaacctacgatgcgtgtgtgtctatggaggcacaggtataagtgagcag
atagcagagctgaagcgtggtgctgagataattgtttgcactcctggtcggatgattgac
atgcttacagctaacaatggccgtgtgactaactgccagagatgcacctatctagtatta
gacgaggctgacaggatgtttgatatgggctttgagcctcaggtcatgcgcatcatcgac
tgcattcgacctgaccgccagacggtcatgttctctgccaccttcccacgtcagatggaa
gcattggccaggaagattcttgacaaacctattgaaatccaagtcggtggtcggagtgtg
gtttgctcagatgttgagcagaatgtggtggtaattgaagaggacgataaattcttgaaa
ctgcttgaactactcggtctctaccaggaacagggtagcgtcctggtatttgtggagaag
caagattctgcggattcactgttcaaagacttgctcaaaagatcgtacccatgtctctcg
ttgcacggaggtatggaccagtttgatcgtgatagcaccatagcagattttaaaaatggt
gtcacaaagttgatgatcgcgacgtctgtggcggcaaggggtcttgatgtcaagcacctc
aaccttgtggtcaactacgactgcccaaaccactacgaagactacgtgcatcgcgtggga
cgcacgggtcgtgcaggcaacaagggtactgcatataccttcttaaccccagagcaaggc
agatttgccattgatgtcatcaaggctctagagatggcagaaaatcctgttcccgaggac
gtccgcaatcttgccaatacctatatagagacgaggaaggcggaaggcaaaaatatcgtc
aagaacagtggcttctctggcaaaggttttaagttcaacgacgaagagaaggccaaagtg
agcgaagcaaaaaagattcagaaatgggcgctcggcttacaagattctgatgacgaggca
gaagccgaggagaaagctgtggaggagatcgacaagcgcttggacgccgtgtttagtaag
aaacctcatgttaagaaagtcgtgccgcaagttggcgaacccgccgtcaaacgtgagggc
gaacaacaagcgaaattcaacctggcctccagcatagcagcgaagatcaatcagaagatc
agtgcaggaaccaataacctggatcctactcaacaagcggcgagtcagattatcaaaggc
ggaactgtaactgcgctaacgggtttggatctggccaagcagttagcccagaaggtacac
accaagctcaactacgagggtccccaggaagaggttaaagagaaagaggaggagaagcaa
gaggcggagcgctatgaagacgaggtggagattaacgagttccctcagacagcaaggtgg
aagatcacttctaaggagacgatcatgaccatcaccgagtactcggagtgcgcagtcaca
gtcagaggcacctatttccctccaggcaaagagccaaaggaaggcgagagaaagatctac
ctttatatcgaagggccctctgagcgtgccattcagctcgccaagtccgagatcaagcgc
atagtgaaagaagagttagtacgactgggtacataccgtgggcctcagccgacaggaaga
tacaaggtgctttga
DBGET
integrated database retrieval system
