Nematostella vectensis (starlet sea anemone): 5518535
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Entry
5518535 CDS
T01037
Name
(RefSeq) retinoblastoma-like protein 1 isoform X2
KO
K04681
retinoblastoma-like protein 1
Organism
nve
Nematostella vectensis (starlet sea anemone)
Pathway
nve04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
nve00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
5518535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nve03000
]
5518535
Transcription factors [BR:
nve03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
5518535
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
AAA_10
Motif
Other DBs
NCBI-GeneID:
5518535
NCBI-ProteinID:
XP_001638474
UniProt:
A7RQ05
LinkDB
All DBs
Position
Unknown
AA seq
1083 aa
AA seq
DB search
MASSNEDEDTITKERFDNVCSELNMDEETAESAWSSYETIRTNYTLEGDSLHWLACALYV
ACRRSVVPTVDSSGTVEGNCVSLTRLLRASKLSLIQFFSKMKKWLDMSNASSEFRKKIEH
LERNFQVSTVIFNKYRPIFLDLFKNPSEDTPKAQRSRKSRKQPCSISDVFSFCWTLYVEA
KGNFPAISDDLVNSYHLLLCCLDLMYSNALAARHRRDLINTEFEGLPSDFNTRDVRGPSD
APCIVDVLCTKYQGIVLEAKSIKEHYWKPFVQKLFEKRVLRGHEESLSGILDLGNFEANW
KAINKEYEEYVLSAGDFDERIFLGEEAHIEIGTPAKLFGSSEVDECQKSGLKKNLQEHFS
KTRSLAPQTPLTGRRYLKEKDPCITPVSTATQSVSRLQAMCSGLKPTPSERLLTIFKECS
RDPLQSIIDRVENLGEIFLKEYVQPSAERPNSPCSTREFALRRLKLAEILYYKVLENITL
SEKRRLQGHLDLTTLLEQDVFHRSLLACCLEIVIFSYNSQRTFPWVISILGLAPYYFYKV
IESLIKAEDGLSRDVVKHLNHIEEQVLESLAWSGDSPLWMTIEQAGGVPSCEDVTIPNHV
EAAHPNQNLLASPIMHPRLQRICGEEGMPRRIMSPTSPTLQDHFGSPGASGARRNLMANF
GGAPARTVAMATASNGHFTRSAGAAQAASNSTASVSQVHPGTTPTLLITQAPASGGGFVV
NGIAQAVVLPSSTATTVQVSLSPRSGSTLATSVIPPGSPVRSPVRLTPQAAVATSHSAST
TPAKPKKTGSLALFFRKVYHMASVRLRDLCARLDVNEELRGKMWTCFEHSLMHLPEIAKD
RHLDQILMCCVYVMGKVTNSELSFQNIMKCYRTQPQAASHVYRSVMIKNRRRAPIPNTGS
ESSRGDSGSTRTSPIRSTSTIPSTPPPPGGSSSTENSPVLETERGDLIEFYNKVFIKTIK
NFALKFSSSDRSLESPPLSPLPIVRNQGHSPRRQVSARHPVYISPHKNGVPMTPTTRMLY
CFSESPAKNLRDINHMLRQGENRKRALLQDDIGAPQAKRSTSEEHLQRRLTSMIEERQAN
ASR
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctctaacgaagacgaggatacaataaccaaagaacgatttgacaatgtctgt
tcggaacttaacatggatgaagaaacggccgagtcggcatggagttcgtacgaaactata
cgcacaaactatacattggagggagatagtctacactggctggcttgtgctttatacgtt
gcttgtagacgcagtgtagttccaaccgtcgacagctctggaacggtggaagggaactgc
gtttccttgactcgcttgcttcgcgcctctaaactaagcttaattcagtttttcagcaag
atgaagaaatggctcgatatgtcgaacgcttcgagtgagttcaggaagaaaattgaacat
cttgagagaaactttcaagtttcgactgtcattttcaataaatacagaccaatctttttg
gacttgttcaagaatcccagtgaagacacaccaaaagcccaaagaagtcgaaaatcgaga
aagcagccctgttctatctcagatgtattctccttttgttggacactctacgtggaagcg
aaagggaacttcccagctatcagtgatgacctggtcaactcatatcacctactgctatgt
tgcctagacctaatgtatagcaatgccctggctgcccgacatcgcagggacctgattaat
actgagtttgaaggtctacctagtgatttcaacacaagagatgtgcgaggtccttctgac
gctccctgtattgttgatgtgctttgtaccaaatatcaaggcatcgtacttgaagcaaaa
agcatcaaagagcactactggaagccttttgtgcagaagctgtttgagaaacgagtacta
agaggccatgaagagagcctctctgggattcttgaccttggcaattttgaggcaaactgg
aaagccattaacaaggagtatgaggagtatgtcttatcagcgggagattttgatgaacgg
atattcctgggagaagaagcacacattgagatcggtactccagcaaaactatttggttct
tcagaagttgatgagtgtcagaagtctggactgaagaaaaatctacaagaacacttttca
aagacgagaagtttagctcctcagacaccgctgacagggcgtcgctacttaaaagagaag
gacccatgtatcacccctgtatcgacggccactcagtctgttagtcgtttgcaggccatg
tgctctggcctcaagccaactcccagcgagagactgcttacaatattcaaggaatgtagt
agagatcctctacagtctataattgaccgtgttgagaatcttggtgaaatatttcttaaa
gaatatgttcagccttcagctgaaagacccaactccccatgttcaacccgagagtttgct
ttgcgacgtcttaagcttgcagaaatactctactacaaggttttggagaacattacttta
tcagagaaaaggagattgcaaggtcatcttgacttgactacccttcttgagcaagatgtc
ttccatcgctcgctccttgcttgttgcctggaaattgtaatcttctcctacaactcacag
agaactttcccatgggtcatcagcatcttggggctggctccttattacttctataaggtt
attgagagccttatcaaagcagaggatggtctatctcgcgatgtggtaaagcatctgaat
catattgaagaacaggtccttgaatctttagcatggtcaggggactctcccctctggatg
acaatagagcaggctgggggtgtaccctcttgtgaggatgtcaccatccctaatcatgtt
gaggcagcccaccctaatcagaacttgttggcatctccgattatgcatccccgactgcag
agaatatgtggagaggaaggaatgccaagacgaataatgtcaccaacatccccaacatta
caagaccattttggatctcctggagctagtggagctcgtcgaaacttgatggcaaacttt
ggaggtgctccggccaggacagttgccatggcaacagcaagtaatggccactttacgaga
tcagcaggggcagctcaggcagcctctaattctacggcgtcagtcagccaggtgcatcct
gggactaccccaacactactgataactcaggctccagcaagtggtggcggctttgtcgtc
aatggcatcgctcaagcagtagtccttcccagctcaacagcaactactgtgcaagtcagc
ctctcgccacgttcaggcagcaccctggcaactagtgtcatccccccagggtcccctgtt
cgcagccctgtgcgcctcacccctcaggctgcagtggctacatcacactctgcatctact
acacctgctaagccaaaaaagacaggctcccttgcactcttctttagaaaggtgtaccac
atggctagtgtgcgactgagagacctttgtgccagactggacgtcaatgaggagctgagg
ggaaaaatgtggacatgctttgagcattcacttatgcatctcccggagatagccaaggat
cgtcatcttgatcagatcctcatgtgctgtgtgtatgttatgggaaaggtcaccaactct
gaattgtcatttcaaaacatcatgaaatgttacaggacacaacctcaggccgcaagccat
gtgtatcgaagcgtaatgatcaagaaccgcaggcgtgcacccatccccaacactggaagt
gaatccagtaggggagattcaggaagcacaagaacaagccccatccggagcacaagcaca
ataccttccacacccccaccccctgggggatcaagcagcacggaaaatagccctgtattg
gagacagaaagaggagacctcatagagttctacaataaggtttttatcaagaccatcaaa
aactttgccttaaagttttcatctagtgacagatcacttgagtctccacctctatcgcca
ctccccattgtaagaaaccaaggccactcacccaggcggcaagtttcagccagacatccg
gtctacatctctccgcacaaaaatggtgtaccaatgacgccaaccactcgaatgctgtac
tgcttcagcgaaagtcctgctaagaatctccgggacattaaccatatgctgagacaaggc
gagaatcgcaagcgggctcttctccaggatgatataggagccccacaggccaagcgatca
accagcgaggagcacctccagcgaaggctgacgagcatgatcgaggagaggcaagccaat
gcctccagatag
DBGET
integrated database retrieval system
