Nicrophorus vespilloides (burying beetle): 108566056
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Entry
108566056 CDS
T04922
Name
(RefSeq) zinc finger protein ubi-d4 B-like
KO
K13196
zinc finger protein ubi-d4
Organism
nvl
Nicrophorus vespilloides (burying beetle)
Pathway
nvl03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
nvl00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108566056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
nvl03041
]
108566056
03036 Chromosome and associated proteins [BR:
nvl03036
]
108566056
Spliceosome [BR:
nvl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108566056
Chromosome and associated proteins [BR:
nvl03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
108566056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DPF1-3_N
PHD
PHD_4
PHD_2
zf-PHD-like
TNP-like_RNaseH_C
Motif
Other DBs
NCBI-GeneID:
108566056
NCBI-ProteinID:
XP_017781243
LinkDB
All DBs
Position
Unknown
AA seq
549 aa
AA seq
DB search
MAAAVLPTATGTNLEKIESFLNDSSYKEALESSANYNTRLCIERRMRLPFLDSQTGVAQG
HSSLFMNKRQRMPGTVPGQIYSYPRQRWRKKRRQYLSMNARAYGRAVDHLLDDDMHSISQ
VENPALQDTDSKDSQLLLKDEVSKEWFYDEQDMLDMDAYDEPDPDSDLDYEESYSKRNKK
RRGTGRGRGVDSPGTPGRRKGSGRGRKKSSIHNFDPTPGDPDKPFACELCGARYKTRPGL
TYHYGHSHKEGASDENSREAAPPQIVPPSAAPIPPMGSAAAMGGGGLPPLVGGPPPPHMG
IGMPIGGGGVPPLHPNLGGPAMPPPPLLGGGLLPPPSGNLGDALPAPGAAPGNVYQDSYV
SFLNHPAGTPGRRGRQSNPPQLPPTQAPPTLPPNLPAPVPPTIEDPPMPVLVPEKTIETP
PQIHSMVATMEQKPKAAPSPYCDFCLGDSNENKKTGGSEELVSCSDCGRSGHPTCLQFTA
NMNISVKKYRWQCIECKCCSVCGTSDNDDQLLFCDDCDRGYHMYCLSPPLTTPPEGSWSC
KLCIHEFHK
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgccgttctgcccaccgccactggtactaatttagagaaaatagaaagtttt
ttaaatgattcttcatacaaggaagctcttgaatcatctgcaaattacaatacaagatta
tgtatagagagaagaatgagactgccctttttggacagccaaacaggagtggcacagggt
cattcatccttatttatgaacaagagacaaaggatgcctggcacagtacctggacaaatt
tacagttatccaaggcaaagatggagaaagaagaggaggcaatatttgagtatgaatgca
agggcatatggtcgagcagttgaccacctgctagatgatgatatgcacagtatatcccaa
gtagagaatccagccctgcaagacactgacagcaaggactcacaattgctgttgaaggat
gaggtctcaaaggaatggttctatgacgaacaggatatgttggatatggatgcatatgat
gaacctgatcctgattctgatttggattatgaggagtcttacagtaagaggaataaaaag
cgtagaggaacaggccgggggcgaggagtcgattctcctggaacacctggtagacggaag
ggaagcggtagaggacgtaagaagtcttcaattcacaatttcgatccgacgccaggcgat
ccggacaagcctttcgcctgtgaactgtgtggggcgcggtacaagacgcggcctggactg
acttaccactacggacattcgcacaaagagggtgcaagtgacgagaattcgcgcgaagcg
gccccgccacaaatcgtgcccccgtcagccgcgcccattccccccatggggtctgccgcc
gccatgggcggtggtgggctgccacccctggtcggcggtccgccgccgccccacatgggc
atcggaatgccgattggcggcggcggcgttcctccgctgcaccccaatctaggcggcccg
gccatgccgccgccacctctcctgggtggcggcctcttgccgcccccttctggtaattta
ggagatgccttgcccgcccccggtgcagctccaggaaacgtctatcaagatagttatgtg
tctttcttgaaccacccagccggcactcccggaaggcgtggccgacagtcgaacccgccc
caattgccgccgactcaggctcctccaactttgccgccaaacttgcccgcacccgttccg
cctaccatagaggatccaccgatgccagtcttggttccagagaaaaccatcgaaacgcct
cctcagatccattcgatggtagcgacgatggagcaaaaaccgaaggccgctcccagtccc
tattgcgatttttgtttaggcgattctaacgagaacaagaaaaccggtggctctgaggag
ctagtttcgtgttcagattgcggaagatcaggccatccaacgtgtttgcaattcacagcc
aatatgaatatatcggtgaaaaagtacagatggcaatgtatcgagtgtaaatgctgttct
gtgtgtggaacttctgataacgacgatcaattattgttttgtgatgattgtgatcgcgga
tatcacatgtattgtctgagtcctccactgactactcctccggaaggttcttggtcttgc
aagttgtgtatccacgaattccacaaatag
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