Nocardia wallacei: NWFMUON74_29140
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Entry
NWFMUON74_29140 CDS
T07034
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nwl
Nocardia wallacei
Pathway
nwl03030
DNA replication
nwl03430
Mismatch repair
nwl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nwl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NWFMUON74_29140
03430 Mismatch repair
NWFMUON74_29140
03440 Homologous recombination
NWFMUON74_29140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nwl03032
]
NWFMUON74_29140
03400 DNA repair and recombination proteins [BR:
nwl03400
]
NWFMUON74_29140
Enzymes [BR:
nwl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NWFMUON74_29140
DNA replication proteins [BR:
nwl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NWFMUON74_29140
DNA repair and recombination proteins [BR:
nwl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NWFMUON74_29140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BCK55142
UniProt:
A0A7G1KIN2
LinkDB
All DBs
Position
complement(3157678..3161214)
Genome browser
AA seq
1178 aa
AA seq
DB search
MSDASFVHLHNHTEYSMLDGMAKVAPLFAEAERLGMPAVGMTDHGNMYGAAEFFRQSRTS
GIKPIIGIEAYVAPESRFSGKRVFWGDPSQKSDDVSGSGAYLHLTMFARNAVGLRNLFTL
SSLASFEGQFGKWPRMDAELIAEHAEGIMATTGCPSGEVQTRLRLGQFDEAYDAAGRWRE
IFGAENFFLEVMDHGLSIERRVRADLLAIGDKVGLPPLATNDCHYVLRQQAAAHEAMLCV
QTGKTLSDPTRFRFGGDGYYLKSAAEMRALWDGEVPGACDATLAVAERVEPYDDIWEFRD
RMPVFPVPDGHTQDSWLRHEVDAGLRWRFPGGVPARYLRRAEYELDIIRDKGFPAYFLVV
GDLVAHAREVGIRVGPGRGSAAGSLVAYALAITNIDPIEHGLLFERFLNPERPSAPDIDI
DFDDRRRGEMIRYATERWGADKVAQVITFGTIKTKAALKDSARVHFGQPGFALADRITKA
LPPAVAAKDIPVAGITDPAHERYGEAAAVRALLDADPDVRRIYDTAVGLEGMVRGAGVHA
CAVILSSEPLMNVVPLWKRPQDGAIITGWDYPSCEAIGLLKMDFLGLRTLTVIGDCLANI
RANRGIEIDLDTLGLDDGKTYAMLARGDNLGVFQMDSAGMRELLLRMAPTEFNDLVASNA
LYRPGPMGVGAHWAYADRKNGREPVTPIHPDLDEPLREILAETYALIVYQEQIMQLAQRV
AGYSLGQADLLRRAMGKKKPEVLAQEFENFRNGMRANGYRDEAVTALWDAVLPFAGYAYN
KSHAAGYSLVMYWTAYLKANYPAEFMAALLTSVGDDKDKSAIYLSDCRKRGIRVLPPDVN
ESAATFTCVGSDIRFGLGAVRNVGEPVVESIVRARESGAFTSFSDYLARTDATACAKKVV
ESLIKAGGFDSLRHPRRGLYLVHGEAVDAAMGTKKAAARGQFDLFSGAVDDTGDTAGVFE
VPVPDREWDTRQLLAFEREMLGLYVSGHPLDDVAQALAARRDTPIAAVVEGRVGHGRKVV
VGGLVAAVDRRVTKKGEPWAIVRLEDLEAAVEILFFPAAYASAATALTEDAVLLVTAHVS
IRDGRMSLLGDQVTVPDLGGLATAGAITVTIPVPACTPAAVRGLRETLQQHPGPTEVRIR
LVGRKGPQLLAIDPRYRVQPSPALMGELKALFGPACLQ
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgcgtccttcgtccatctgcacaaccacaccgagtactcgatgctcgacggc
atggcgaaggtggcgccgctgttcgccgaggccgagcggctcgggatgcccgccgtcggc
atgaccgaccacggcaacatgtacggggccgccgagttcttccgccagtcgcgcacctcg
ggaatcaagccgatcatcgggatcgaggcgtacgtcgcgccggaatcccggttctccggt
aagcgcgtgttctggggcgacccgtcgcagaagtccgacgacgtctccggttccggcgcc
tacctgcacctgaccatgttcgcgagaaacgcggtgggcctgcgcaatctgttcacgctg
tcgtcgctggcctcgttcgaggggcagttcggcaagtggccgcgcatggacgccgagctg
atcgccgagcacgccgagggcatcatggcgaccaccggctgtccgtccggcgaggtccag
acccgattgcgcctggggcagttcgacgaggcctacgacgcggccgggcggtggcgggag
atcttcggtgcggagaacttcttcctcgaggtgatggaccacggattgtcgatcgagcgg
cgggtgcgcgcggatctgctcgcgatcggcgacaaggtcggcctaccgccgttggccacc
aacgactgtcactacgtgctgcggcagcaggccgccgcacacgaggcgatgctgtgcgtg
cagaccggcaagaccctgtccgatcccacccgcttccggttcggcggggacggctactac
ctcaagtcggccgccgagatgcgggcgctgtgggacggcgaggtgcccggcgcctgtgac
gccacgctcgcggtggccgaacgcgtcgaaccctacgacgacatctgggaattccgggat
cgcatgcccgtgttcccggtcccggacgggcacacccaggacagctggctgcgccacgag
gtcgacgcgggcctgcgctggcgcttcccgggcggcgtgcccgcgcggtacctgcggcgg
gccgagtacgagctggacatcatccgcgacaagggttttccggcctacttcctggtggtg
ggtgacctggtggcgcacgcgcgcgaggtgggcatccgggtcgggccggggcgcggctcg
gccgccgggtcgctggtcgcctacgcgctcgccatcaccaatatcgacccgatcgagcac
ggcctgctgttcgaacggttcctcaaccccgagcggccctcggcgcccgatatcgacatc
gacttcgacgaccgccgccgcggcgagatgatccgctacgccaccgaacgctggggcgcg
gacaaggtcgctcaggtcatcacgttcggcaccatcaagaccaaggcggcgctgaaggat
tccgcgcgagtgcatttcggccagcccggattcgccctcgccgaccgcatcaccaaggcg
ctgccgcccgcggtggccgccaaggacattccggtcgccgggatcaccgatcccgcacac
gagcgctacggcgaggccgcggcggtccgcgccctgctcgacgcggacccggacgtgcgc
cggatctacgacaccgcggtgggtttggagggcatggtgcgcggcgcgggcgtgcacgcc
tgcgcggtgatcctgtccagcgaaccgctgatgaacgtcgtcccgctgtggaaacggccg
caggacggggcgatcatcaccgggtgggactatccctcctgcgaggccatcggcctgctc
aagatggatttcctcggcctgcgcaccctcacggtgatcggcgactgcctggcgaatatc
cgcgccaaccgcggcatcgagatcgacctcgacaccctcgggctcgacgacggcaagacc
tacgccatgctggcccgcggcgacaatctcggtgtgttccagatggattcggcgggcatg
cgggagctcctgctacgaatggcgcccaccgaattcaacgacctggtggcgtccaacgcg
ctgtaccggccgggtccgatgggggtcggcgcgcactgggcctacgccgaccgcaagaac
ggccgcgagccggtcacccccatccatcccgacctggacgagccgttgcgggagatcctg
gccgaaacctacgcgctgatcgtctatcaggagcagatcatgcaactcgcccagcgggtg
gccgggtactcgctgggccaggcggatctgctgcgccgcgcgatgggcaagaagaagccg
gaggtgctggcccaggagttcgagaacttccgtaacggcatgcgcgccaacggctatcgc
gacgaggcggtgacggcgctgtgggacgcggtgctgcccttcgccgggtacgcctacaac
aagtcgcacgccgccgggtacagcctggtcatgtactggacggcctatctcaaggcgaac
tatcccgccgagttcatggcggcgctgctgacctcggtcggcgacgacaaggacaagtcc
gcgatctacctgtccgactgccgcaaacgcggcatccgggtactgccgccggacgtcaac
gagtccgccgcgaccttcacctgcgtcggctccgacatccggttcgggctgggcgcggtg
cgcaatgtgggcgagccggtggtcgaatccatcgtgcgggcgcgcgaatccggcgcgttc
accagtttctccgactacctggccaggaccgacgccaccgcgtgcgccaagaaggtggtc
gaatcgctcatcaaggcaggcggtttcgattcgctgcgccatccgcggcggggcctgtat
ctggtgcacggcgaggccgtggacgccgcgatgggcaccaagaaggccgccgcgcgtggg
caattcgacctgttctccggcgccgtggacgacacgggcgacaccgcgggggttttcgag
gtgccggtacccgatcgggagtgggatacccggcagctgctggcattcgagcgggagatg
ctggggctctacgtgtccgggcatccgctcgacgacgtggcgcaggcgctcgcggcgcgg
cgcgacaccccgatcgccgcggtggtcgagggccgggtggggcacggccggaaggtcgtg
gtcggcgggctcgtcgccgccgtcgaccgccgcgtcaccaagaagggcgagccgtgggcg
atcgtgcggctggaagacctggaggcggccgtggagatcctgttcttccccgcggcctac
gcgagcgcggccaccgccctcaccgaggacgccgtgctgctcgtcaccgcgcacgtcagc
atccgagacggccggatgtcgctgctcggcgaccaggtcaccgtgcccgacctgggcggg
ctcgcgacggccggagcgatcaccgtgaccatcccggttccggcctgcacgcccgcggcc
gtccgcggcctgcgcgagacgctgcagcagcatcccggaccgaccgaggtgcgaattcgg
ttggtgggcaggaagggcccgcagttgctcgcgatcgacccgcgctaccgcgtacagccc
tcccccgcgctgatgggcgaactgaaggctctcttcggcccggcctgcctccagtag
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