Nitrosococcus wardiae: E3U44_16050
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Entry
E3U44_16050 CDS
T05933
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
nwr
Nitrosococcus wardiae
Brite
KEGG Orthology (KO) [BR:
nwr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nwr03021
]
E3U44_16050
Transcription machinery [BR:
nwr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
E3U44_16050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QBQ55858
UniProt:
A0A4P7C008
LinkDB
All DBs
Position
3398337..3399272
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AA seq
311 aa
AA seq
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MVNEKFPSSQSANPPVTLVDHEEIENSADPTLEAGFTLENLYMRDAGKAPLLSAEEEKHY
ARLAQRGDRKARDRMIESNLRMVVKMATRHVSRGLPLMDLIEEGNLGLIHAVEKFDPELG
FRFSTYASWWIEQAIERALMNQVRTVRIPVHVLKTIRRYQREAKRLGQTHNTEPRLEEIA
KTLNEPLEKIQRYLSFQIPETSLNDPLSENNEDCLADLLPDERNNPAILWEIFDKKATIN
HQLSQLTERQQEVLKRRYGLDGYEAKTLEEVGQSIGITRERVRQIQQTAIKRLRAMIENE
TSKEDNCTVAM
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggtgaacgaaaaatttccctcttcccaatcggcaaatcccccggtcactttggtcgat
catgaagagatcgaaaatagcgccgatcccaccttagaggctggttttactctagagaac
ctttatatgcgagatgccggcaaagcccccctgctaagcgccgaagaagaaaaacattat
gcgcgattggcccaaaggggagaccgcaaggcccgtgaccgcatgattgaaagcaacttg
cgcatggttgtaaaaatggccacccgtcatgttagccggggcctgcctttgatggatttg
attgaagaaggcaatcttgggctaattcacgccgtggaaaaatttgatcccgagcttggc
tttcggttttccacctatgccagttggtggatagaacaggccatagaacgggccttgatg
aatcaagtacgaaccgttcgaattcccgttcatgttttaaaaaccatccgccgctatcaa
cgggaagcaaaacggctggggcaaacccataacaccgaaccgcgcttggaggaaatcgcc
aaaacacttaacgaacccctggagaaaatccaacgctatctgagtttccagatcccggag
acttcactcaatgatcccctaagcgagaacaatgaagattgtcttgccgatttactcccg
gatgaaaggaacaacccggccattctatgggaaattttcgataaaaaagccactattaat
catcagctatcgcagcttactgagcgccaacaggaggtccttaaacgccgttacggactc
gatggatatgaagcaaagacacttgaagaagtcggtcaaagtattgggattactcgcgag
cgggtacgacagattcagcaaacggctatcaagcggctgcgggcgatgattgaaaacgag
acttcaaaagaagataactgcacagtggcaatgtga
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