Neisseria zoodegmatis: SAMEA4504057_1671
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Entry
SAMEA4504057_1671 CDS
T06683
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nzo
Neisseria zoodegmatis
Brite
KEGG Orthology (KO) [BR:
nzo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nzo03016
]
SAMEA4504057_1671 (truB)
Enzymes [BR:
nzo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SAMEA4504057_1671 (truB)
Transfer RNA biogenesis [BR:
nzo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SAMEA4504057_1671 (truB)
Prokaryotic type
SAMEA4504057_1671 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PP1_bind
Motif
Other DBs
NCBI-ProteinID:
SNU80160
LinkDB
All DBs
Position
1:1817654..1818574
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AA seq
306 aa
AA seq
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MNPPSKPQKRPVNGVLLLDKPQGLSSNTALQKARRLYRAEKAGHTGVLDPLATGLLPVCF
GEATKFAQYLLDADKAYTATLKLGEATSTGDAEGEVVATGRADISAEDFQTACQALTGPI
RQVPPMFSALKHEGKPLYEYAHKGIVIERKPRDIVIYAIDVTSFHAPEAVIDVRCSKGTY
IRTLSEDIAKHIHTFAHLTALRRTETAGFSIREAHTLAALEALDESGRDALLLPCDVLVR
HLPGLTLPDAAVQMLKFGRQPEYRDANLPADTPLRIYAEDGSFVGLADYLPHAGRLKALR
LMNTAT
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgccttccaaaccgcaaaaacgccccgtcaacggcgtgctgctgctcgacaaa
ccgcaaggcttatccagcaacactgccctgcaaaaagcccgccgcctgtaccgcgccgag
aaagccggccacaccggcgtgctcgacccgctcgccaccggtctcttgcctgtgtgtttc
ggcgaagcgaccaagttcgcgcaatatctattggatgccgacaaagcctacacggccacg
ctcaaactcggcgaagcgacttcaaccggagatgccgaaggtgaagtcgtcgccacaggc
cgcgccgacatttcagccgaagattttcagacggcctgccaagcgctgaccggccctatc
cgccaagtgccgccgatgttttccgcgttgaagcacgaaggcaagccgctttacgaatat
gcgcacaaaggcatcgtgatcgaacgcaaaccgcgcgatatcgtgatttacgccattgat
gttacttcgttccacgcacccgaagccgtgatcgatgtgcgttgcagcaaaggcacttac
atccgcacattaagcgaagacatcgccaaacacatccacaccttcgcccacctgaccgcg
ctgcgccgcaccgaaaccgccggattttccatccgggaagcgcataccttggcagcgctg
gaagccttagacgaaagcgggcgcgacgccctgctgctgccctgcgacgtattggtgcgg
catctgcccggcctgaccttgcccgatgccgcggtgcaaatgctcaagttcggccgccaa
cctgaataccgcgacgcaaatctgcccgctgacacgcctttgcggatttatgcagaagac
ggcagctttgtagggctggccgattatctgccccatgcaggccgtctgaaagctttgcgc
ttaatgaacaccgcaacataa
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