Strawberry lethal yellows phytoplasma (CPA): SLY_0435
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Entry
SLY_0435 CDS
T02674
Name
(GenBank) hypothetical protein
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
nzs
Strawberry lethal yellows phytoplasma (CPA)
Pathway
nzs03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nzs00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SLY_0435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nzs03021
]
SLY_0435
03400 DNA repair and recombination proteins [BR:
nzs03400
]
SLY_0435
Transcription machinery [BR:
nzs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SLY_0435
DNA repair and recombination proteins [BR:
nzs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SLY_0435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
AGL90355
UniProt:
R4RLZ5
LinkDB
All DBs
Position
364245..364712
Genome browser
AA seq
155 aa
AA seq
DB search
MKKTKKSKSLLETAYEIAKKQNKPIYIFDLLEQTQKKHQIEELKDYKKINQLYLDITLSG
QFVFCDEKHLIIKENHKEHWDKDFFEKPKNNQEEDSELQKLDLEDVVSEKPEDEDEDTSN
KDDELLKNDDHDEVLDEDDKEEDSEDLSDDYEYFL
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaacaaaaaaatccaaatcgcttttagaaacagcttatgaaatagctaaaaaa
caaaataaaccaatttatatttttgatttattagaacaaacacaaaaaaaacatcaaatt
gaagaattaaaagattataaaaaaatcaatcagctttatttagatattactttatccggg
caatttgttttttgcgatgagaaacatttaattattaaagaaaaccacaaagaacattgg
gataaagatttttttgaaaagccaaaaaataatcaagaagaagattcagagcttcaaaaa
ttagatttggaagatgttgtttcagaaaaacccgaagatgaagacgaagatacaagtaac
aaagatgatgaattattaaaaaatgatgatcatgatgaagttttagatgaagatgataaa
gaagaagattctgaagatttatcagatgattatgaatattttttataa
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